G1069495


Basic Information

Item Value
gene id G1069495
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 39149551 ~ 39213845 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1218031
CTTTATAACTACTCTATACACATTGCAGATACATGACTACACTCAATaagtaattgtctgcatcatttccaatcccccatgtatatatataaaaaatatttaatatgCAGAACTTACCAGGAAGTCTGACTCATCGAAGGAGTGGAGAGACAGATCATCATCCTCGTCCATATCCCTCACATCAAGCTTTGTCACCTTTCCATTCTCAACTTTCAGCTTTGGTGTCCTCCTTTCATGATCCTCATCATCACTCTGTGTATCAGAGTCAACTAGTCAGAGACCATCCTCCTCCCAGTGATGTCACTCAACAAAGACATGGACCGTAGGGTACAACTCTTTTACCTCAGATTCACAGTCAGTGAAGGAGTAGATGGAAAAGTCATCAGAACTGGAGGATGAGATCACGTCATCACATTTTCTCTCTATCAGCCGAGTCACCCTTCCAGactgaggagacagagaaaggcatGTACTCATGGCAGCCATAGAATACACTGGCATTGACCCTCAAGGAAATGTAGAATATGTAGGCAATCCAACATGGTTGTACAAGTAGTGAGTAATACATGGGTAAATGAACATGCAATAAATGCAACTCCCATAACATTAGGGGTGGGGCAAAAGATCTCGAATGGATAATTGTCAATTCAACCAAGCCAACCAAAATGGCCATATGAATCAACAGATTGATCTAACTGTTGTGTCTCTATGGGAACAGCAGAGATGACCTGGCTGAGAGGCTCTGGATTTATGCTCCATCCATCCCCAGATGTCTGGTCCTGCCCATAGCTCACAATGATTGGTTGTTAACAGTAAAGAATGAATTCAACACTGCTTTGCTCATTTTGGCCTTGAATTGTGTATCAATAAATAATATAAGGACTGTTATGTGGTTGAATTTGAATGTGACTTACAGGCCTTTTGTGGATCTGAGTGGTCTGCACTGAAGTAGACTGTCAAGACAGCATTCAATGAGGTTAGATAGGGATATCTGCATTTGCTTTAATTCTGAGAACTGCAGTTTGTACATGCAGAATGCATAACTaatgtgtatgtgtttttgtttcaGGTCAGATATGACTTACAGGCTTTGGCCTTCTGTGCACCTTGCCGGTTGGCCACAACACGGATTCAGGGGTGTTCACCCTCACTGGTTTCAACTGTCAACACAACACTCAATTTAAAATG

Function

NR:

description
uncharacterized protein LOC110537587

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1218031 True 1188 lncRNA 0.42 3 39149551 39213845

Neighbor

gene id symbol gene type direction distance location
LOC110537583 LOC106567696 coding downstream 63652 39077640 ~ 39085899 (-)
LOC110537580 LOC106567695 coding downstream 71961 39073248 ~ 39077590 (-)
LOC110537579 LOC106603438 coding downstream 77031 39041272 ~ 39072520 (-)
LOC110537576 LOC106567693 coding downstream 121643 39014593 ~ 39027908 (-)
LOC110537578 LOC106567694 coding downstream 143432 38997382 ~ 39006119 (-)
LOC110537596 NA coding upstream 26812 39240657 ~ 39245631 (-)
LOC110537598 LOC106567714 coding upstream 95371 39309216 ~ 39312123 (-)
fkbp6 LOC106567715 coding upstream 122209 39336054 ~ 39343006 (-)
zgc:171740 LOC106567716 coding upstream 129770 39343615 ~ 39358852 (-)
si:dkey-183i3.6 LOC106567717 coding upstream 157349 39371194 ~ 39377049 (-)
G1069462 NA non-coding downstream 35099 39113832 ~ 39114452 (-)
G1069455 LOC106567699 non-coding downstream 41412 39107064 ~ 39108139 (-)
G1069285 NA non-coding downstream 239263 38856053 ~ 38910288 (-)
ripply3 ripply3 non-coding downstream 373092 38766085 ~ 38776459 (-)
G1069512 NA non-coding upstream 2443 39216288 ~ 39276066 (-)
G1069468 NA non-coding upstream 18183 39232028 ~ 39240517 (-)
G1069469 NA non-coding upstream 22247 39236092 ~ 39236563 (-)
G1069533 NA non-coding upstream 67813 39281658 ~ 39286252 (-)
G1069540 NA non-coding upstream 74108 39287953 ~ 39288179 (-)
G1069456 LOC106567699 other downstream 40589 39108300 ~ 39108962 (-)
LOC110539142 NA other downstream 1443180 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 1482297 37603158 ~ 37667366 (-)
LOC110537540 LOC106567738 other downstream 1642407 37505206 ~ 37507238 (-)
G1071725 NA other upstream 1825021 41038866 ~ 41039931 (-)
G1073009 NA other upstream 2832018 42045863 ~ 42062632 (-)
G1074731 NA other upstream 3490158 42704003 ~ 42713923 (-)
G1075335 NA other upstream 4349940 43563785 ~ 43564240 (-)

Expression


Co-expression Network