G1069497


Basic Information

Item Value
gene id G1069497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 39184748 ~ 39218075 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1218037
TGCCCGCTGGTCCCAGGTTCCCCATGATGTGCATGGTCTGTACAGGTGTGTTGACCATGTGGCTGGTCTTCACAAAGTCCTCCGAGGGGTCCCAGGTAATCAGCCTGGACTTGGGGATGGTGCGGTCACTGCAGACCAACAGAATATCACAAACACATTTTGCATACAAGGGTATGGTGTAATGTGAACATACCGGTACACTGTTTGTCTTCAAAACAGCACGACGCATCAATGCTGCTTCAATTACATTCACTTTAATAATAATTCACTTTGGTGAGTAACAGGGACCTACACTGGGCGTCTGTCCTGTCGTCTGTGTCTGACATTGGCCATCCTATGTGCCAGTAAGGTAGGATTGGACTTGACCTGCGTCACCATACTCTGGGAATGCTGTAGTGAATATATCAAAAACAGCTTTAAAACACTAACGTTTCTTTTGGACAGAAAATAGGTAAATGCTTTGTTTTGAATAATGAAATTGTCACGTCTgctccagctccctctctctgacgCTCGAGgtcGCCAGGctgctcatcattacgcacacctgtcaccattttTACACGCACCAGCGCTTCatcggactcacctggactccatcacgtcattgattacctcccctatatctgtcacttcctcagtttcaTTCCCATGTCTGCATCgatgttgttttgtttctcttgTCCAGACTCTGTTCGTCTTTAGTTTCATGTCTATTTATTAATAAATCCTCCCCCTATACTTGCTTCCCGTCTCCCAGAGTCTTTGGTTACAGA

Function

NR:

description
PREDICTED: Meckel syndrome type 1 protein homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1218037 True 776 lncRNA 0.46 2 39184748 39218075

Neighbor

gene id symbol gene type direction distance location
LOC110537583 LOC106567696 coding downstream 98849 39077640 ~ 39085899 (-)
LOC110537580 LOC106567695 coding downstream 107158 39073248 ~ 39077590 (-)
LOC110537579 LOC106603438 coding downstream 112228 39041272 ~ 39072520 (-)
LOC110537576 LOC106567693 coding downstream 156840 39014593 ~ 39027908 (-)
LOC110537578 LOC106567694 coding downstream 178629 38997382 ~ 39006119 (-)
LOC110537596 NA coding upstream 22582 39240657 ~ 39245631 (-)
LOC110537598 LOC106567714 coding upstream 91141 39309216 ~ 39312123 (-)
fkbp6 LOC106567715 coding upstream 117979 39336054 ~ 39343006 (-)
zgc:171740 LOC106567716 coding upstream 125540 39343615 ~ 39358852 (-)
si:dkey-183i3.6 LOC106567717 coding upstream 153119 39371194 ~ 39377049 (-)
G1069457 NA non-coding downstream 32758 39109658 ~ 39151990 (-)
G1069462 NA non-coding downstream 70296 39113832 ~ 39114452 (-)
G1069455 LOC106567699 non-coding downstream 76609 39107064 ~ 39108139 (-)
G1069285 NA non-coding downstream 274460 38856053 ~ 38910288 (-)
G1069468 NA non-coding upstream 13953 39232028 ~ 39240517 (-)
G1069469 NA non-coding upstream 18017 39236092 ~ 39236563 (-)
G1069533 NA non-coding upstream 63583 39281658 ~ 39286252 (-)
G1069540 NA non-coding upstream 69878 39287953 ~ 39288179 (-)
G1069543 NA non-coding upstream 75369 39293444 ~ 39293906 (-)
G1069456 LOC106567699 other downstream 75786 39108300 ~ 39108962 (-)
LOC110539142 NA other downstream 1478377 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 1517494 37603158 ~ 37667366 (-)
LOC110537540 LOC106567738 other downstream 1677604 37505206 ~ 37507238 (-)
G1071725 NA other upstream 1820791 41038866 ~ 41039931 (-)
G1073009 NA other upstream 2827788 42045863 ~ 42062632 (-)
G1074731 NA other upstream 3485928 42704003 ~ 42713923 (-)
G1075335 NA other upstream 4345710 43563785 ~ 43564240 (-)

Expression


Co-expression Network