G1069503


Basic Information

Item Value
gene id G1069503
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 39194857 ~ 39249331 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1218047
aattattgtgcaatttacactaagtgtacaaaacattaaggacacctgctatttccatgacagactgaccaggtgaatccaagtgaaagctatgatcccttattgatgtcacttgtagatgaaggggacaggacaggttaaagaatgatttttaagcctggagacaattgagacatggatagtgtatgtgtgccattcagagggtgaacaggcaagacaaaagatttaagtgtctttgaacggagtatggtcgtaggtgccaggcacaccggtttgtgtcaagaactgcaacactgatgggtttttcacgctcatgTTCCgttccaccaaccaaaggacatccagccaacttggcaactgtgggaagcattggcttcaacatgggcctgcatccctgtggaacgcatttaacaccttgtagaatccataccccgataaattgaggctgttctgaggacaaaagggggtggggggataactagatattaggaaggtgtccttattattttgtacactcagtgtataacctaTAGGTACTATCTTTaccagcatcataaaagctgatattATTTCATGGGCCTATTGCAACGAAGATTGGCCACTAGAATATTGCCAGTTTATATTCATAACTAAAAGTTCACCTAATTGTATCTTCTGTTATAAAGACCATATTCAAATGAATAAAAACGAAAATAGAAAActgtttcccatctcaagagaTTCAATTAAAATATGACTACAATAAGTGCCTATTAAGTAAAGGCTGACCATAttatatttttttgttattttttttcttttaacCCCTTTATCTCCCCAATTTTCGTGGTATCatattggtagttacagtcttgtctcattgctgcaactccctacggactcgggagaggcgaaggtagagagccatgcgtcctccacgaaacacgaccctgacaagctgcactgcttcctgacacaatgcccgcttaacccggaagccagccacaccaatgtgtcggaggaaacaactCTCCCATTCACCTGTGTGAACTTCATCTTCGTGGCATGCTAGCCTTTTACCGGCTGCGGAGAGCCTTTTCTGTTTGCATTTTGTTGTGCACCAGGTTTTCCTGTCTTTCCATGTTCTGTTTGTGAGAGCTGGCTCTGACCCATAACAGTCAATCCTCTTTGCCAGGAACCTTCTTTAGCACTTTACATTTTCCCAAATGCTTCCAAACTGATGCTTTCTCACAGCTGCTCTTAGTCTTGGGTTGAGAAGTCATTCTCCAAACCTAATCGCAAACAAAGAAAAGATTAAAACACATGACGGTCCAACACAATAGGGGAGGGGGGCATAGGGAAGGTAAGGGAGAGGAGATAAAAAGAAAAGACTTCCTCCGTGTCAGGTAAGCAGTCTCGAAGTGTACCCTCACCAACTTACCGGACTGAGTGAGTTCTGAACATCCCTCGCTGTCCTCTGTTCCTGCATCCAAGTCTTCTTGGGCCTCTTTCTGGTGTCTGTCTTGACTCTTTATTACGTTTTCTCAGTTCTTTCTCAGGCTTGCCTGAAAAACACAAAAGGATGGAACATACATAAGAGTAACAACAAATCCACATATTAGCAAGCAACgacatta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1218047 True 1616 lncRNA 0.43 3 39194857 39249331

Neighbor

gene id symbol gene type direction distance location
LOC110537583 LOC106567696 coding downstream 108958 39077640 ~ 39085899 (-)
LOC110537580 LOC106567695 coding downstream 117267 39073248 ~ 39077590 (-)
LOC110537579 LOC106603438 coding downstream 122337 39041272 ~ 39072520 (-)
LOC110537576 LOC106567693 coding downstream 166949 39014593 ~ 39027908 (-)
LOC110537578 LOC106567694 coding downstream 188738 38997382 ~ 39006119 (-)
LOC110537598 LOC106567714 coding upstream 59885 39309216 ~ 39312123 (-)
fkbp6 LOC106567715 coding upstream 86723 39336054 ~ 39343006 (-)
zgc:171740 LOC106567716 coding upstream 94284 39343615 ~ 39358852 (-)
si:dkey-183i3.6 LOC106567717 coding upstream 121863 39371194 ~ 39377049 (-)
si:dkey-183i3.5 LOC106567720 coding upstream 149665 39398996 ~ 39405263 (-)
G1069498 NA non-coding downstream 1269 39156553 ~ 39193588 (-)
G1069480 NA non-coding downstream 9638 39124230 ~ 39185219 (-)
G1069457 NA non-coding downstream 42867 39109658 ~ 39151990 (-)
G1069462 NA non-coding downstream 80405 39113832 ~ 39114452 (-)
G1069455 LOC106567699 non-coding downstream 86718 39107064 ~ 39108139 (-)
G1069533 NA non-coding upstream 32327 39281658 ~ 39286252 (-)
G1069540 NA non-coding upstream 38622 39287953 ~ 39288179 (-)
G1069543 NA non-coding upstream 44113 39293444 ~ 39293906 (-)
G1069544 NA non-coding upstream 46294 39295625 ~ 39295859 (-)
G1069600 LOC106567719 non-coding upstream 146250 39395581 ~ 39396334 (-)
G1069456 LOC106567699 other downstream 85895 39108300 ~ 39108962 (-)
LOC110539142 NA other downstream 1488486 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 1527603 37603158 ~ 37667366 (-)
LOC110537540 LOC106567738 other downstream 1687713 37505206 ~ 37507238 (-)
G1071725 NA other upstream 1789535 41038866 ~ 41039931 (-)
G1073009 NA other upstream 2796532 42045863 ~ 42062632 (-)
G1074731 NA other upstream 3454672 42704003 ~ 42713923 (-)
G1075335 NA other upstream 4314454 43563785 ~ 43564240 (-)

Expression


Co-expression Network