G1069469


Basic Information

Item Value
gene id G1069469
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 39236092 ~ 39236563 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1218001
ACAGGGCAGGGAAGAAATTGAGATATTTGTGTTTGGTTTTAACACCTGTATATAGGGGGTGCCATTTGAATttgtattttattttttaaggtaaattaattatagtggggtttaattaacctatataaggactttagaaagtgccaccatagacatgtttttctaaaaaaaaatccatgagtttagataaagccaaacagtgagacatttagttcaaatttggaaacatgagaaaacgagctacagacagataaggggaaaaggcagacagaagagccctcccctgcactgcagagaccttgaaggttggagagcagagaggagaagttTTAAAAGGGAGCCAGGACGAGCAAAGATAACAGAATGTGTAGATAACAGTTACTGAGTGGAGACAaaagggagaattggacatgtggaaaatgaaag

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1218001 True 426 lncRNA 0.38 2 39236092 39236563

Neighbor

gene id symbol gene type direction distance location
LOC110537583 LOC106567696 coding downstream 150193 39077640 ~ 39085899 (-)
LOC110537580 LOC106567695 coding downstream 158502 39073248 ~ 39077590 (-)
LOC110537579 LOC106603438 coding downstream 163572 39041272 ~ 39072520 (-)
LOC110537576 LOC106567693 coding downstream 208184 39014593 ~ 39027908 (-)
LOC110537578 LOC106567694 coding downstream 229973 38997382 ~ 39006119 (-)
LOC110537596 NA coding upstream 4094 39240657 ~ 39245631 (-)
LOC110537598 LOC106567714 coding upstream 72653 39309216 ~ 39312123 (-)
fkbp6 LOC106567715 coding upstream 99491 39336054 ~ 39343006 (-)
zgc:171740 LOC106567716 coding upstream 107052 39343615 ~ 39358852 (-)
si:dkey-183i3.6 LOC106567717 coding upstream 134631 39371194 ~ 39377049 (-)
G1069499 NA non-coding downstream 11928 39159168 ~ 39224164 (-)
G1069497 NA non-coding downstream 18017 39184748 ~ 39218075 (-)
G1069495 NA non-coding downstream 22247 39149551 ~ 39213845 (-)
G1069498 NA non-coding downstream 42504 39156553 ~ 39193588 (-)
G1069480 NA non-coding downstream 50873 39124230 ~ 39185219 (-)
G1069533 NA non-coding upstream 45095 39281658 ~ 39286252 (-)
G1069540 NA non-coding upstream 51390 39287953 ~ 39288179 (-)
G1069543 NA non-coding upstream 56881 39293444 ~ 39293906 (-)
G1069544 NA non-coding upstream 59062 39295625 ~ 39295859 (-)
G1069600 LOC106567719 non-coding upstream 159018 39395581 ~ 39396334 (-)
G1069456 LOC106567699 other downstream 127130 39108300 ~ 39108962 (-)
LOC110539142 NA other downstream 1529721 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 1568838 37603158 ~ 37667366 (-)
LOC110537540 LOC106567738 other downstream 1728948 37505206 ~ 37507238 (-)
G1071725 NA other upstream 1802303 41038866 ~ 41039931 (-)
G1073009 NA other upstream 2809300 42045863 ~ 42062632 (-)
G1074731 NA other upstream 3467440 42704003 ~ 42713923 (-)
G1075335 NA other upstream 4327222 43563785 ~ 43564240 (-)

Expression


Co-expression Network