G1069600 (LOC106567719)


Basic Information

Item Value
gene id G1069600
gene name LOC106567719
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 39395581 ~ 39396334 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1218171
CTGTTGGTGTTCTCTGACTCCTGTTGTGATGTGTTCCACTGCGGTCACCAACAGGTTTACACACAGAACAGGGAAGCGGGTGAAGAGGTCGACAAACATTAGGCCTGACAGAGGGCTTTTCCTGCGCGTCATGAAGGAGCAGAGCGCCCCTTTAAAGATGGCCGACACCCTCTCCACGTCCACGTTACCCATGAACCTCAGCTCAGTAGAAGGTGTTGTCTTGCCATCTGCTGAGGCCCCGGGCACCCCCCTCTCAGCACCTTGACCAGGTACAGAGATGCACTGAAGAAGTAGAGTGACACTGAGGAGTCAGACAGCTTCTGGGTTTTGGTCATGAGTTTCTCCAGCAGGTCGTGGAGCTCCCCCTGTCTGTTGCCCACGGTCTTACAGTACTGCTTGGCACGGCACAGCTGGTTCCT

Function

NR:

description
myb-binding protein 1A-like protein isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1218171 True 419 lncRNA 0.55 3 39395581 39396334

Neighbor

gene id symbol gene type direction distance location
si:dkey-183i3.6 LOC106567717 coding downstream 18532 39371194 ~ 39377049 (-)
zgc:171740 LOC106567716 coding downstream 36729 39343615 ~ 39358852 (-)
fkbp6 LOC106567715 coding downstream 52575 39336054 ~ 39343006 (-)
LOC110537598 LOC106567714 coding downstream 83458 39309216 ~ 39312123 (-)
LOC110537596 NA coding downstream 149950 39240657 ~ 39245631 (-)
si:dkey-183i3.5 LOC106567720 coding upstream 2662 39398996 ~ 39405263 (-)
si:dkey-183i3.9 yk005 coding upstream 10239 39406573 ~ 39409769 (-)
ddx10 LOC106567721 coding upstream 28788 39425122 ~ 39494021 (-)
zw10 LOC106567722 coding upstream 97862 39494196 ~ 39502812 (-)
LOC110537606 LOC106567723 coding upstream 109589 39505923 ~ 39508142 (-)
G1069544 NA non-coding downstream 99722 39295625 ~ 39295859 (-)
G1069543 NA non-coding downstream 101675 39293444 ~ 39293906 (-)
G1069540 NA non-coding downstream 107402 39287953 ~ 39288179 (-)
G1069533 NA non-coding downstream 109329 39281658 ~ 39286252 (-)
G1069468 NA non-coding downstream 155064 39232028 ~ 39240517 (-)
G1069606 NA non-coding upstream 19382 39415716 ~ 39416033 (-)
G1069610 NA non-coding upstream 22773 39419107 ~ 39419344 (-)
G1069635 NA non-coding upstream 107791 39504125 ~ 39504676 (-)
G1069650 NA non-coding upstream 119328 39515662 ~ 39515872 (-)
G1069652 NA non-coding upstream 120989 39517323 ~ 39517552 (-)
G1069456 LOC106567699 other downstream 286619 39108300 ~ 39108962 (-)
LOC110537579 LOC106603438 other downstream 323109 39041272 ~ 39072520 (-)
LOC110539142 NA other downstream 1689210 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 1728327 37603158 ~ 37667366 (-)
G1071725 NA other upstream 1642532 41038866 ~ 41039931 (-)
G1073009 NA other upstream 2649529 42045863 ~ 42062632 (-)
G1074731 NA other upstream 3307669 42704003 ~ 42713923 (-)
G1075335 NA other upstream 4167451 43563785 ~ 43564240 (-)
G1075399 NA other upstream 4264225 43660559 ~ 43660837 (-)

Expression


Co-expression Network