Gene
RNA
| Item | Value |
|---|---|
| gene id | G1070309 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 40158593 ~ 40158812 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1218935 | True | 220 | lncRNA | 0.35 | 1 | 40158593 | 40158812 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ncam1a | LOC106567728 | coding | downstream | 115104 | 39727774 ~ 40043489 (-) |
| LOC118937672 | NA | coding | downstream | 179062 | 39973042 ~ 39979531 (-) |
| LOC110537608 | LOC106567727 | coding | downstream | 468261 | 39568361 ~ 39690332 (-) |
| LOC110537607 | LOC100194713 | coding | downstream | 612560 | 39518597 ~ 39546033 (-) |
| LOC110537606 | LOC106567723 | coding | downstream | 650451 | 39505923 ~ 39508142 (-) |
| sc5d | sc5d | coding | upstream | 934370 | 41093182 ~ 41101891 (-) |
| LOC118937914 | NA | coding | upstream | 935770 | 41094582 ~ 41094719 (-) |
| arhgap32b | arhgap32 | coding | upstream | 971344 | 41130156 ~ 41364010 (-) |
| igsf9bb | LOC106567733 | coding | upstream | 1217478 | 41376290 ~ 41566655 (-) |
| LOC118937883 | NA | coding | upstream | 1579909 | 41738721 ~ 41740327 (-) |
| G1070308 | NA | non-coding | downstream | 755 | 40157594 ~ 40157838 (-) |
| G1070304 | NA | non-coding | downstream | 2477 | 40155798 ~ 40156116 (-) |
| G1070297 | NA | non-coding | downstream | 6092 | 40152184 ~ 40152501 (-) |
| G1070284 | NA | non-coding | downstream | 15849 | 40142531 ~ 40142744 (-) |
| G1070221 | NA | non-coding | downstream | 103480 | 40054622 ~ 40055113 (-) |
| G1070439 | NA | non-coding | upstream | 104338 | 40263150 ~ 40263365 (-) |
| G1070463 | NA | non-coding | upstream | 122179 | 40280991 ~ 40281191 (-) |
| G1070590 | NA | non-coding | upstream | 182089 | 40340901 ~ 40341207 (-) |
| G1070655 | NA | non-coding | upstream | 254395 | 40413207 ~ 40414502 (-) |
| G1070672 | NA | non-coding | upstream | 272015 | 40430827 ~ 40431105 (-) |
| fkbp6 | LOC106567715 | other | downstream | 820619 | 39336054 ~ 39343006 (-) |
| G1069456 | LOC106567699 | other | downstream | 1049631 | 39108300 ~ 39108962 (-) |
| LOC110537579 | LOC106603438 | other | downstream | 1086121 | 39041272 ~ 39072520 (-) |
| LOC110539142 | NA | other | downstream | 2452222 | 37672182 ~ 37706371 (-) |
| LOC110537546 | ppm1e | other | downstream | 2491339 | 37603158 ~ 37667366 (-) |
| G1071725 | NA | other | upstream | 880054 | 41038866 ~ 41039931 (-) |
| G1073009 | NA | other | upstream | 1887051 | 42045863 ~ 42062632 (-) |
| G1074731 | NA | other | upstream | 2545191 | 42704003 ~ 42713923 (-) |
| G1075335 | NA | other | upstream | 3404973 | 43563785 ~ 43564240 (-) |
| G1075399 | NA | other | upstream | 3501747 | 43660559 ~ 43660837 (-) |
