Gene
RNA
| Item | Value |
|---|---|
| gene id | G1070442 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 40264571 ~ 40264945 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1219077 | True | 375 | lncRNA | 0.42 | 1 | 40264571 | 40264945 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937980 | NA | coding | upstream | 89030 | 40175351 ~ 40175541 (+) |
| htr3a | LOC106567725 | coding | upstream | 700801 | 39556689 ~ 39563770 (+) |
| htr3b | LOC106567726 | coding | upstream | 709000 | 39546047 ~ 39555571 (+) |
| LOC110537603 | LOC106567719 | coding | upstream | 862851 | 39380904 ~ 39401720 (+) |
| LOC110538893 | rfc2 | coding | upstream | 893213 | 39362997 ~ 39371358 (+) |
| cadm1a | LOC106567730 | coding | downstream | 246213 | 40511158 ~ 40938098 (+) |
| LOC110539145 | NA | coding | downstream | 764395 | 41029340 ~ 41030449 (+) |
| anapc13 | anc13 | coding | downstream | 861462 | 41126407 ~ 41130505 (+) |
| LOC110537617 | LOC106567734 | coding | downstream | 1414598 | 41679543 ~ 41732016 (+) |
| LOC110537618 | LOC105024202 | coding | downstream | 1485000 | 41749945 ~ 41762641 (+) |
| G1070438 | NA | non-coding | upstream | 1057 | 40263297 ~ 40263514 (+) |
| G1070367 | NA | non-coding | upstream | 2327 | 40261984 ~ 40262244 (+) |
| G1070165 | NA | non-coding | upstream | 209390 | 40054914 ~ 40055181 (+) |
| G1070164 | NA | non-coding | upstream | 212179 | 40052170 ~ 40052392 (+) |
| G1069735 | LOC106567728 | non-coding | upstream | 489859 | 39755566 ~ 39774712 (+) |
| G1070467 | NA | non-coding | downstream | 19312 | 40284257 ~ 40284460 (+) |
| G1070471 | NA | non-coding | downstream | 22137 | 40287082 ~ 40287415 (+) |
| G1070678 | NA | non-coding | downstream | 168302 | 40433247 ~ 40433455 (+) |
| G1070791 | NA | non-coding | downstream | 305772 | 40570717 ~ 40592202 (+) |
| styxl1 | styxl1 | other | upstream | 1174628 | 39077007 ~ 39090045 (+) |
| prkrip1 | LOC106567678 | other | upstream | 2023198 | 38231737 ~ 38241376 (+) |
| G1067321 | LOC106567676 | other | upstream | 2095623 | 38168337 ~ 38168948 (+) |
| G1067221 | NA | other | upstream | 2325295 | 37938832 ~ 37939276 (+) |
| G1067156 | LOC100380745 | other | upstream | 2399096 | 37854888 ~ 37865475 (+) |
| G1070479 | NA | other | downstream | 27507 | 40292452 ~ 40292734 (+) |
| G1071144 | NA | other | downstream | 849633 | 41114578 ~ 41114957 (+) |
| G1071159 | NA | other | downstream | 872491 | 41137436 ~ 41137868 (+) |
| G1072789 | NA | other | downstream | 1932105 | 42197050 ~ 42216163 (+) |
| G1074265 | NA | other | downstream | 3580222 | 43845167 ~ 43845968 (+) |
