G1071725


Basic Information

Item Value
gene id G1071725
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 41038866 ~ 41039931 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1220392
TCTCCCATTTATGAAATGGATGGGGTGTACAAATATTTGACTGCAAAAGTGATTacgtttatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacctaaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaagcaaaattattcagcccctttactttcggtGCAGCAAACtcactccagaagttcagtgaggatctctgaatgatccaatgttgacctaaattactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcaataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcaaagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccaaaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagagaagatggttaaaattgatgggaagatggatggagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1220392 True 1066 TUCP 0.42 1 41038866 41039931

Neighbor

gene id symbol gene type direction distance location
ncam1a LOC106567728 coding downstream 995377 39727774 ~ 40043489 (-)
LOC118937672 NA coding downstream 1059335 39973042 ~ 39979531 (-)
LOC110537608 LOC106567727 coding downstream 1348534 39568361 ~ 39690332 (-)
LOC110537607 LOC100194713 coding downstream 1492833 39518597 ~ 39546033 (-)
LOC110537606 LOC106567723 coding downstream 1530724 39505923 ~ 39508142 (-)
sc5d sc5d coding upstream 53251 41093182 ~ 41101891 (-)
LOC118937914 NA coding upstream 54651 41094582 ~ 41094719 (-)
arhgap32b arhgap32 coding upstream 90225 41130156 ~ 41364010 (-)
igsf9bb LOC106567733 coding upstream 336359 41376290 ~ 41566655 (-)
LOC118937883 NA coding upstream 698790 41738721 ~ 41740327 (-)
G1071722 NA non-coding downstream 2727 41035918 ~ 41036139 (-)
G1071719 NA non-coding downstream 7119 41031540 ~ 41031747 (-)
G1071716 NA non-coding downstream 9411 41029250 ~ 41029455 (-)
G1071713 NA non-coding downstream 14290 41024349 ~ 41024576 (-)
G1071707 NA non-coding downstream 23980 41014581 ~ 41014886 (-)
G1071767 NA non-coding upstream 43341 41083272 ~ 41083602 (-)
G1071770 NA non-coding upstream 46588 41086519 ~ 41087028 (-)
G1071772 NA non-coding upstream 49342 41089273 ~ 41089472 (-)
G1071781 NA non-coding upstream 68107 41108038 ~ 41108329 (-)
G1071783 NA non-coding upstream 69858 41109789 ~ 41110015 (-)
fkbp6 LOC106567715 other downstream 1700892 39336054 ~ 39343006 (-)
G1069456 LOC106567699 other downstream 1929904 39108300 ~ 39108962 (-)
LOC110537579 LOC106603438 other downstream 1966394 39041272 ~ 39072520 (-)
LOC110539142 NA other downstream 3332495 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 3371612 37603158 ~ 37667366 (-)
G1073009 NA other upstream 1005932 42045863 ~ 42062632 (-)
G1074731 NA other upstream 1664072 42704003 ~ 42713923 (-)
G1075335 NA other upstream 2523854 43563785 ~ 43564240 (-)
G1075399 NA other upstream 2620628 43660559 ~ 43660837 (-)
G1075509 NA other upstream 2734133 43774064 ~ 43774425 (-)

Expression


Co-expression Network