Gene
RNA
| Item | Value |
|---|---|
| gene id | G1071140 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 41111203 ~ 41111485 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1219794 | True | 283 | lncRNA | 0.36 | 1 | 41111203 | 41111485 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539145 | NA | coding | upstream | 80754 | 41029340 ~ 41030449 (+) |
| cadm1a | LOC106567730 | coding | upstream | 173105 | 40511158 ~ 40938098 (+) |
| LOC118937980 | NA | coding | upstream | 935662 | 40175351 ~ 40175541 (+) |
| htr3a | LOC106567725 | coding | upstream | 1547433 | 39556689 ~ 39563770 (+) |
| htr3b | LOC106567726 | coding | upstream | 1555632 | 39546047 ~ 39555571 (+) |
| anapc13 | anc13 | coding | downstream | 14922 | 41126407 ~ 41130505 (+) |
| LOC110537617 | LOC106567734 | coding | downstream | 568058 | 41679543 ~ 41732016 (+) |
| LOC110537618 | LOC105024202 | coding | downstream | 638460 | 41749945 ~ 41762641 (+) |
| fez1 | fez1 | coding | downstream | 662560 | 41774045 ~ 41800668 (+) |
| robo3 | robo3 | coding | downstream | 816979 | 41928464 ~ 42208567 (+) |
| G1071138 | NA | non-coding | upstream | 1146 | 41109753 ~ 41110057 (+) |
| G1071135 | NA | non-coding | upstream | 3198 | 41107707 ~ 41108005 (+) |
| G1071131 | NA | non-coding | upstream | 7464 | 41103528 ~ 41103739 (+) |
| G1071065 | LOC106576971 | non-coding | upstream | 9092 | 41092674 ~ 41102111 (+) |
| G1071128 | NA | non-coding | upstream | 21724 | 41089250 ~ 41089479 (+) |
| G1071149 | NA | non-coding | downstream | 7019 | 41118504 ~ 41118839 (+) |
| G1071152 | NA | non-coding | downstream | 9826 | 41121311 ~ 41121699 (+) |
| G1071193 | NA | non-coding | downstream | 75365 | 41186850 ~ 41187069 (+) |
| G1071194 | NA | non-coding | downstream | 75627 | 41187112 ~ 41187315 (+) |
| G1070479 | NA | other | upstream | 818469 | 40292452 ~ 40292734 (+) |
| styxl1 | styxl1 | other | upstream | 2021260 | 39077007 ~ 39090045 (+) |
| prkrip1 | LOC106567678 | other | upstream | 2869830 | 38231737 ~ 38241376 (+) |
| G1067321 | LOC106567676 | other | upstream | 2942255 | 38168337 ~ 38168948 (+) |
| G1067221 | NA | other | upstream | 3171927 | 37938832 ~ 37939276 (+) |
| G1071144 | NA | other | downstream | 3093 | 41114578 ~ 41114957 (+) |
| G1071159 | NA | other | downstream | 25951 | 41137436 ~ 41137868 (+) |
| G1072789 | NA | other | downstream | 1085565 | 42197050 ~ 42216163 (+) |
| G1074265 | NA | other | downstream | 2733682 | 43845167 ~ 43845968 (+) |
| G1074270 | LOC106567637 | other | downstream | 2745265 | 43856750 ~ 43860609 (+) |
