G1073009


Basic Information

Item Value
gene id G1073009
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 42045863 ~ 42062632 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1221758
gatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacagttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgtagagagcatcatgaagaacaagggacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattttaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttgttaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatgcccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattct

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1221758 True 976 TUCP 0.42 2 42045863 42062632

Neighbor

gene id symbol gene type direction distance location
LOC110537621 msantd2 coding downstream 154500 41884739 ~ 41891363 (-)
esama LOC106567655 coding downstream 168718 41805076 ~ 41877145 (-)
LOC118937883 NA coding downstream 305536 41738721 ~ 41740327 (-)
igsf9bb LOC106567733 coding downstream 479208 41376290 ~ 41566655 (-)
arhgap32b arhgap32 coding downstream 681853 41130156 ~ 41364010 (-)
LOC110537624 robo4 coding upstream 162539 42225171 ~ 42253779 (-)
tmem218 tmem218 coding upstream 196018 42258650 ~ 42265787 (-)
LOC110538899 LOC106567646 coding upstream 894805 42957437 ~ 43517782 (-)
LOC118937884 LOC106611372 coding upstream 1483401 43546033 ~ 43575350 (-)
LOC118937674 cssa04h11orf63 coding upstream 1586464 43649096 ~ 43686262 (-)
G1072538 NA non-coding downstream 242406 41803237 ~ 41803457 (-)
G1072497 LOC107751387 non-coding downstream 254602 41785132 ~ 41791261 (-)
G1072519 NA non-coding downstream 275946 41769695 ~ 41769917 (-)
G1072500 NA non-coding downstream 311810 41733850 ~ 41734053 (-)
G1073025 NA non-coding upstream 16267 42078899 ~ 42079144 (-)
G1073081 NA non-coding upstream 104268 42166900 ~ 42192399 (-)
G1073256 NA non-coding upstream 344517 42407149 ~ 42407395 (-)
G1074536 NA non-coding upstream 356163 42418795 ~ 42431550 (-)
G1074908 NA non-coding upstream 850445 42913077 ~ 42918069 (-)
G1071725 NA other downstream 1005932 41038866 ~ 41039931 (-)
fkbp6 LOC106567715 other downstream 2707889 39336054 ~ 39343006 (-)
G1069456 LOC106567699 other downstream 2936901 39108300 ~ 39108962 (-)
LOC110537579 LOC106603438 other downstream 2973391 39041272 ~ 39072520 (-)
LOC110539142 NA other downstream 4339492 37672182 ~ 37706371 (-)
G1074731 NA other upstream 641371 42704003 ~ 42713923 (-)
G1075335 NA other upstream 1501153 43563785 ~ 43564240 (-)
G1075399 NA other upstream 1597927 43660559 ~ 43660837 (-)
G1075509 NA other upstream 1711432 43774064 ~ 43774425 (-)
G1076460 NA other upstream 2392016 44454648 ~ 44455270 (-)

Expression


Co-expression Network