Gene
RNA
| Item | Value |
|---|---|
| gene id | G1073261 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 42410818 ~ 42411026 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1222028 | True | 209 | lncRNA | 0.38 | 1 | 42410818 | 42411026 |
42,408,400
42,408,800
42,409,200
42,409,600
42,410,000
42,410,400
42,410,800
42,411,200
42,411,600
42,412,000
42,412,400
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537628 | LOC106567648 | coding | upstream | 39480 | 42361750 ~ 42371338 (+) |
| LOC110537627 | pknox2 | coding | upstream | 49827 | 42267015 ~ 42360991 (+) |
| robo3 | robo3 | coding | upstream | 202251 | 41928464 ~ 42208567 (+) |
| fez1 | fez1 | coding | upstream | 610150 | 41774045 ~ 41800668 (+) |
| LOC110537618 | LOC105024202 | coding | upstream | 648177 | 41749945 ~ 41762641 (+) |
| opcml | opcml | coding | downstream | 113939 | 42524965 ~ 42934947 (+) |
| lim2.1 | LOC106567645 | coding | downstream | 1215223 | 43626249 ~ 43640278 (+) |
| bsx | LOC106567644 | coding | downstream | 1232279 | 43643305 ~ 43645368 (+) |
| LOC110537636 | LOC106567643 | coding | downstream | 1297309 | 43708335 ~ 43725115 (+) |
| LOC100135842 | LOC106567641 | coding | downstream | 1381095 | 43792121 ~ 43802192 (+) |
| G1073255 | NA | non-coding | upstream | 4156 | 42406452 ~ 42406662 (+) |
| G1072802 | robo4 | non-coding | upstream | 180911 | 42229017 ~ 42229907 (+) |
| G1072756 | NA | non-coding | upstream | 263938 | 42143129 ~ 42146880 (+) |
| G1072633 | NA | non-coding | upstream | 428538 | 41933851 ~ 41982280 (+) |
| G1073263 | NA | non-coding | downstream | 503 | 42411529 ~ 42411741 (+) |
| G1073275 | NA | non-coding | downstream | 7598 | 42418624 ~ 42483204 (+) |
| G1073342 | NA | non-coding | downstream | 110582 | 42521608 ~ 42544269 (+) |
| G1073411 | NA | non-coding | downstream | 199454 | 42610480 ~ 42646075 (+) |
| G1073639 | NA | non-coding | downstream | 502071 | 42913097 ~ 42918137 (+) |
| G1072789 | NA | other | upstream | 194655 | 42197050 ~ 42216163 (+) |
| G1071159 | NA | other | upstream | 1272950 | 41137436 ~ 41137868 (+) |
| G1071144 | NA | other | upstream | 1295861 | 41114578 ~ 41114957 (+) |
| G1070479 | NA | other | upstream | 2118084 | 40292452 ~ 40292734 (+) |
| styxl1 | styxl1 | other | upstream | 3320875 | 39077007 ~ 39090045 (+) |
| G1074265 | NA | other | downstream | 1434141 | 43845167 ~ 43845968 (+) |
| G1074270 | LOC106567637 | other | downstream | 1445724 | 43856750 ~ 43860609 (+) |
| G1074437 | LOC106567630 | other | downstream | 1716606 | 44127632 ~ 44134118 (+) |
| G1075891 | capns1 | other | downstream | 2019051 | 44430077 ~ 44439184 (+) |
| G1075963 | NA | other | downstream | 2040280 | 44451306 ~ 44451940 (+) |
