G1075256


Basic Information

Item Value
gene id G1075256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 43451348 ~ 43452333 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1224124
gtatgcaaaaaaaGGGAAGAATGATTTTATGATATACTAATATAATTGCTAAAGAGAAATAGATAGAGGTCAAAATGATTGGCAATAATattctagcaccctccccttatGAGGATAATgacacagcctttttctaaaatgctttatgagattggagaacacattgggagggatcttagaccatttaCCATCCATAATCTgttcagatccttgatatcctttgtctgctcCTATCGACTGCCCTCTTCAagtcaaaccacaggttttcaatggggttcaagtccggagactgaccACTGACCATTGCAAAATGTCTTTGTTGATTTTGAATAGTGCTTGGGGTTATTATCTTGatggaagatccacttgtggccaagtGTCAGCCTCCTTGCAGAAGCAACCAGGTTTGTGgataaaatgtcctggtacttggtaaagttcatgattCCGTTGACCTTAACACATAATATCAAAAATctaattatttgtcacatgtgccgaatacaacagtgaaatgcttacctaaaAGGCatgaaccaacaatgcagttttaagaaaaaaataagtgttaaagtaTTTACTATAAAAAATATAAACTGAGGTAAacaataaagaaataaaaatgaaaaaataagaaaatagaaaaataagaaataattACAGAGCAACAACAAAATAAGGTTAGTCAAGATAATTGAGgcaaatatgtacatgtaggtaaagtgactatgcatagataataaacagagaggagcagcagtTTAAAAATAAAGGGGGTTCAATGCAAATTGTCCGGGTGTTCCggagtgttatggcttgggggtagaacaagggccccaggaccagtggaagaaaAATAGAtgcataacatcaaagatccaccaccatatttcactGTAGGTATGAGGTACGTTTCTGCATATGCTTtggtgtgcgtggccaaaaagctctattttcatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1224124 True 960 lncRNA 0.36 2 43451348 43452333

Neighbor

gene id symbol gene type direction distance location
tmem218 tmem218 coding downstream 1185561 42258650 ~ 42265787 (-)
LOC110537624 robo4 coding downstream 1197569 42225171 ~ 42253779 (-)
LOC110537621 msantd2 coding downstream 1559985 41884739 ~ 41891363 (-)
esama LOC106567655 coding downstream 1574203 41805076 ~ 41877145 (-)
LOC118937883 NA coding downstream 1711021 41738721 ~ 41740327 (-)
LOC118937884 LOC106611372 coding upstream 93700 43546033 ~ 43575350 (-)
LOC118937674 cssa04h11orf63 coding upstream 196763 43649096 ~ 43686262 (-)
hspa8 hspa8 coding upstream 273135 43725468 ~ 43731026 (-)
LOC118937902 NA coding upstream 274106 43726439 ~ 43726532 (-)
LOC118937903 NA coding upstream 274956 43727289 ~ 43727382 (-)
G1074918 NA non-coding downstream 516435 42927955 ~ 42934913 (-)
G1074908 NA non-coding downstream 533279 42913077 ~ 42918069 (-)
G1074536 NA non-coding downstream 1019798 42418795 ~ 42431550 (-)
G1073256 NA non-coding downstream 1043953 42407149 ~ 42407395 (-)
G1073081 NA non-coding downstream 1258949 42166900 ~ 42192399 (-)
G1075412 NA non-coding upstream 221762 43674095 ~ 43674408 (-)
G1075479 NA non-coding upstream 267968 43720301 ~ 43720848 (-)
LOC110537637 LOC106567642 non-coding upstream 306096 43757940 ~ 43769513 (-)
G1075506 NA non-coding upstream 317848 43770181 ~ 43770510 (-)
G1075510 NA non-coding upstream 322242 43774575 ~ 43775191 (-)
G1074731 NA other downstream 737425 42704003 ~ 42713923 (-)
G1073009 NA other downstream 1388716 42045863 ~ 42062632 (-)
G1071725 NA other downstream 2411417 41038866 ~ 41039931 (-)
fkbp6 LOC106567715 other downstream 4113374 39336054 ~ 39343006 (-)
G1069456 LOC106567699 other downstream 4342386 39108300 ~ 39108962 (-)
G1075335 NA other upstream 111452 43563785 ~ 43564240 (-)
G1075399 NA other upstream 208226 43660559 ~ 43660837 (-)
G1075509 NA other upstream 321731 43774064 ~ 43774425 (-)
G1076460 NA other upstream 1002315 44454648 ~ 44455270 (-)
LOC110537661 LOC101073377 other upstream 1094186 44546519 ~ 44601149 (-)

Expression


Co-expression Network