Gene
RNA
| Item | Value |
|---|---|
| gene id | G1075538 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 43864869 ~ 43865070 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1224429 | True | 202 | lncRNA | 0.34 | 1 | 43864869 | 43865070 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537640 | LOC106567637 | coding | downstream | 913 | 43840844 ~ 43863956 (-) |
| LOC110537639 | zgc:101846 | coding | downstream | 38501 | 43825477 ~ 43826368 (-) |
| LOC110537637 | LOC106567642 | coding | downstream | 95356 | 43757940 ~ 43769513 (-) |
| LOC118937901 | NA | coding | downstream | 136017 | 43728759 ~ 43728852 (-) |
| LOC118937905 | NA | coding | downstream | 136696 | 43728080 ~ 43728173 (-) |
| LOC110537642 | LOC106567634 | coding | upstream | 55824 | 43920894 ~ 43945854 (-) |
| LOC110537647 | LOC106567631 | coding | upstream | 241564 | 44106634 ~ 44109916 (-) |
| LOC110537649 | LOC106567630 | coding | upstream | 261856 | 44126926 ~ 44135806 (-) |
| LOC110537650 | LOC106567629 | coding | upstream | 295856 | 44160926 ~ 44169528 (-) |
| LOC118937676 | NA | coding | upstream | 337111 | 44202181 ~ 44208228 (-) |
| G1075536 | NA | non-coding | downstream | 25696 | 43838971 ~ 43839173 (-) |
| G1075535 | NA | non-coding | downstream | 26251 | 43838392 ~ 43838618 (-) |
| G1075528 | NA | non-coding | downstream | 37900 | 43826743 ~ 43826969 (-) |
| G1075427 | LOC107691633 | non-coding | downstream | 70158 | 43794115 ~ 43794711 (-) |
| G1075516 | NA | non-coding | downstream | 79582 | 43785056 ~ 43785287 (-) |
| G1075539 | vps11 | non-coding | upstream | 1321 | 43866391 ~ 43867024 (-) |
| G1075600 | NA | non-coding | upstream | 118830 | 43983900 ~ 44018865 (-) |
| G1075664 | NA | non-coding | upstream | 198444 | 44063514 ~ 44063953 (-) |
| G1075429 | NA | non-coding | upstream | 272895 | 44137965 ~ 44144948 (-) |
| G1075693 | NA | non-coding | upstream | 292103 | 44157173 ~ 44157466 (-) |
| G1075509 | NA | other | downstream | 90444 | 43774064 ~ 43774425 (-) |
| G1075399 | NA | other | downstream | 204032 | 43660559 ~ 43660837 (-) |
| G1075335 | NA | other | downstream | 300629 | 43563785 ~ 43564240 (-) |
| G1074731 | NA | other | downstream | 1150946 | 42704003 ~ 42713923 (-) |
| G1073009 | NA | other | downstream | 1802237 | 42045863 ~ 42062632 (-) |
| G1076460 | NA | other | upstream | 589578 | 44454648 ~ 44455270 (-) |
| LOC110537661 | LOC101073377 | other | upstream | 681449 | 44546519 ~ 44601149 (-) |
| gria4b | LOC106567580 | other | upstream | 1268782 | 45133844 ~ 45296904 (-) |
| G1078323 | LOC106567565 | other | upstream | 2337534 | 46202604 ~ 46206088 (-) |
| G1078783 | NA | other | upstream | 2951373 | 46816443 ~ 46817065 (-) |
