G1074500


Basic Information

Item Value
gene id G1074500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 44230262 ~ 44230675 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1223317
TTTCTATTCTGGTtcgagccagtttgcgctgttctgcgaagggagtagtacacagcgttgtacgagatcttcagtttcttggcaatttctcacatggaatagccttcatttctcagaacaagaatagactgatgagtttcagaagaaaggtctttgtttctggccattttgagtctgtaatcaaacccataaacgctgacgctccagatactcaactagtctaaagaaggccagttttatagcTTATTTAATTAGAACAaggtttcagctgtgctaacataattgcaaaagggttttctaatgatcaattagccttttaaaatgataaacgtggattagctaacacaacgtgccattggaacacaggagtgatggttgcagaTAATGGGCCACTGTAcgactatgtagatattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1223317 True 414 lncRNA 0.40 1 44230262 44230675

Neighbor

gene id symbol gene type direction distance location
LOC110537651 LOC106567627 coding upstream 4639 44220981 ~ 44225623 (+)
LOC110537648 LOC106567632 coding upstream 123731 44092613 ~ 44106531 (+)
LOC118937675 NA coding upstream 132907 44096518 ~ 44097355 (+)
LOC110537645 NA coding upstream 147020 44077132 ~ 44083242 (+)
LOC110537644 LOC106567633 coding upstream 156250 44023588 ~ 44074012 (+)
LOC110537652 NA coding downstream 4295 44234970 ~ 44237967 (+)
LOC110537660 LOC106567595 coding downstream 352973 44583648 ~ 44593276 (+)
LOC110537663 LOC106567592 coding downstream 403602 44634277 ~ 44693208 (+)
LOC110537662 LOC106567591 coding downstream 467846 44698521 ~ 44744620 (+)
LOC110537664 LOC106567588 coding downstream 527365 44758040 ~ 44767468 (+)
G1074471 NA non-coding upstream 43558 44186483 ~ 44186704 (+)
G1074460 NA non-coding upstream 58234 44171756 ~ 44172028 (+)
G1074458 NA non-coding upstream 59702 44170291 ~ 44170560 (+)
G1074453 NA non-coding upstream 71556 44158500 ~ 44158706 (+)
G1074452 NA non-coding upstream 72794 44157181 ~ 44157468 (+)
G1074503 NA non-coding downstream 4991 44235666 ~ 44235882 (+)
G1074506 NA non-coding downstream 9129 44239804 ~ 44240142 (+)
G1074507 NA non-coding downstream 9745 44240420 ~ 44289899 (+)
G1075796 NA non-coding downstream 75260 44305935 ~ 44306352 (+)
G1075805 NA non-coding downstream 81963 44312638 ~ 44312839 (+)
G1074437 LOC106567630 other upstream 101312 44127632 ~ 44134118 (+)
G1074270 LOC106567637 other upstream 369653 43856750 ~ 43860609 (+)
G1074265 NA other upstream 384294 43845167 ~ 43845968 (+)
G1072789 NA other upstream 2014099 42197050 ~ 42216163 (+)
G1071159 NA other upstream 3092394 41137436 ~ 41137868 (+)
G1075891 capns1 other downstream 199402 44430077 ~ 44439184 (+)
G1075963 NA other downstream 220631 44451306 ~ 44451940 (+)
G1075958 NA other downstream 243073 44473748 ~ 44475666 (+)
G1077158 NA other downstream 1380870 45611545 ~ 45613765 (+)
nrgna NA other downstream 1669954 45900621 ~ 45920265 (+)

Expression


Co-expression Network