G1075936


Basic Information

Item Value
gene id G1075936
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 44429066 ~ 44429678 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1224853
AATGAAGAGGCGACAATGCGTGGTAAACGTTGCGTAGCTAGCTACAATTTTGTAAAGCCGTGACTCTTTAACATGAGTTTAGCTAGCGTTATTTGTGGATAAACATGGGCAAATTTGAAAAACGACATTTGATTGAGGCATTGTGCTTTTTAAAGTGCTAATATGCTACCATTTGCCATACCAACAGGGTTTACCGCTGTGtacattaacgttagctagcaagtcaTGCATTTTTTTCGAAAGGGTAACTAACTAATGTAGCTACTTAAATAGGTTGCAGGGCTTGTATTCTTTTTCTTTCATGCAATGTAACGGGAACCAAATATAATATAAATGCGCATTCGTGGACACTTCACTTTACCTCATTTTTGATGCGCCTCTTTAGCACGCCCACCTGCCGATTTTTATCCAGCTTATACTGTAATCAGAATTCTATAATTTTTCAAATGCATCTTCTTTTAGTTGTATGCTGTCTATTTGATATAGGTCCAGTGTTGTACTGAGAATTGTTTTGGGAAGGTCGAGACCAGAGAGAAAGCAGACCACGAGATGGATAAGGGGCATTGTGGAAGATGTCTGCCTCACTTCAATGAatacacatttattaaaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1224853 True 613 lncRNA 0.38 1 44429066 44429678

Neighbor

gene id symbol gene type direction distance location
LOC110538901 LOC106603699 coding downstream 31098 44391032 ~ 44397968 (-)
LOC110537655 LOC106567623 coding downstream 40212 44377943 ~ 44388854 (-)
LOC110537654 LOC106567624 coding downstream 55869 44332876 ~ 44373197 (-)
LOC110537653 LOC106567625 coding downstream 134055 44245607 ~ 44295011 (-)
LOC118937676 NA coding downstream 220838 44202181 ~ 44208228 (-)
LOC110537656 capns1 coding upstream 392 44430070 ~ 44439278 (-)
alkbh6 alkbh6 coding upstream 27298 44456976 ~ 44473459 (-)
nova1 LOC106567594 coding upstream 50165 44479843 ~ 44519222 (-)
LOC118937885 NA coding upstream 134546 44564224 ~ 44569140 (-)
LOC110537661 LOC101073377 coding upstream 165856 44546519 ~ 44601149 (-)
G1075950 NA non-coding downstream 2754 44426097 ~ 44426312 (-)
G1075945 NA non-coding downstream 11438 44417426 ~ 44417628 (-)
G1075944 NA non-coding downstream 12239 44416378 ~ 44416827 (-)
G1075939 NA non-coding downstream 19062 44409773 ~ 44410004 (-)
G1075825 NA non-coding downstream 102160 44326590 ~ 44326906 (-)
G1076458 NA non-coding upstream 22806 44452484 ~ 44452684 (-)
G1076474 NA non-coding upstream 41991 44471669 ~ 44472035 (-)
G1076475 NA non-coding upstream 43164 44472842 ~ 44473190 (-)
G1076465 NA non-coding upstream 46616 44476294 ~ 44477245 (-)
G1076464 NA non-coding upstream 47692 44477370 ~ 44478159 (-)
G1075509 NA other downstream 654641 43774064 ~ 43774425 (-)
G1075399 NA other downstream 768229 43660559 ~ 43660837 (-)
G1075335 NA other downstream 864826 43563785 ~ 43564240 (-)
G1074731 NA other downstream 1715143 42704003 ~ 42713923 (-)
G1073009 NA other downstream 2366434 42045863 ~ 42062632 (-)
G1076460 NA other upstream 24970 44454648 ~ 44455270 (-)
gria4b LOC106567580 other upstream 704174 45133844 ~ 45296904 (-)
G1078323 LOC106567565 other upstream 1772926 46202604 ~ 46206088 (-)
G1078783 NA other upstream 2386765 46816443 ~ 46817065 (-)

Expression


Co-expression Network