G1076713


Basic Information

Item Value
gene id G1076713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 44879438 ~ 44882247 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1225711
gaatactttcgcaaggcactgtaatgcaTCTCCACGCACTTGTGTTAAAGAAATGTACATGGATCGTTGGTTAAGGGGATGGAGGCAAGACAGCGGCGTTGTGACTAGAATTCTCTTTTTGTATTGTCAGTGGGAATTGTGACGATTGACGTTTTGGCCATGACAATGTTTTGGCTGATTGTCCGATGATGTTGTTTTATATCTTGGGTCCTGTCTTAATTAACAGTCACCAAATTGCCTTTAATTGACCTATACTCAAATGCACAACCAACAATTAAATTACAACTTGTAACATGGCAACTAATCAGGAGCTTTGTTTATAAAATGTCTAAGTCCAATTTTGAGATTACAACTAAGGCTTGTccatactatatatactataatcGCTATTCTATTTTGGTTTAGAGATTAATTCAAAATTTTCCCTTATTGTCATAGGCAGGCTAAATAGTTTCTTTCAATATCTATTCATACCTACAGTAATCAGTGTTATTAGTACACTTCATATACTGATGAAGTACATTTGATGAGTACAGTCAGATTGACCTCTGGACATTAGCTGTCTCTAGGACTTTGCATACACTGTGTATACCACATCACTGTAAAAACCTTATTTAATCGTGTGATATTTCTAACGAGCACAGATTTAGCTGTTTGCCTAATTAATTATTGAAGCAAATTTTTATTCTGTAAATAAATTCTGTATCATATGACTCTGCTTTTTATAATTGTGGAGCAGTCAATGATTTTTAAGTATTGAAGGTGAACGCCGGTAAATGACAAAATACAGTATCATATACATACAGATGTCAACAACAGAAATGTGTCAAGACTGCCAGTTTTGGCATATTAAAGTTATGTTAGTGTTGATGTCTGTAAGCAGGATGTCACCCCCACAGGCATCGCACACACTCCCGCGCATACGTCATAAGCCATgatttttttatttcagctcatgaaacatgggaccaacacactACAAGTtgcatttgtatttttgttcagtgtagctttAAAATGGCTAAATTCtttctcagcctcatggcaaaatgtgtagaatatcaGGAAATTAGCTCAGGGATTGCTGACAGTCGGGACTATCCTTGCCCAGCAGGGaaacttattttttttaatatttgaTTTTGTTGCATTATTTGAGCCAAAAAGATTTGTTTTAGAATTTTCGAAATACTTTCAATACAATGGCTCTATGCCCTTGTACGGAGCAAAGGATCCTAATTTCAAAACTCCCCAAAAAGATTTACAATTCTAAAAACAGGCAATAATGGATATTAACTGATACATTTTCTTATGTAGTTTCTTGCAATAGCCCTCTGTAACTTTAAAGAGTATTTCTCTCAAACCTGTGATTACCAGAAGATGTGTCCGGAGATTTGGTGAACTCAGGAGTCCAGGAGATTCAGGAATGAGCAGGGTCAACTACACCATAAGGTCCCCTTATTCATGTCCCCTTACTCATGTTCTCATTACATGTAGTGCAAAAAAAACATGGTCTTGTTGCACTACATGGTCTGCAAAGTTATGTTTTTGGGAAGGATTTTCAAATGAATTCTTTTTCATATTTTACAAATATTTGGATTGAACTTTTGGTTTTAGAGGCAAAAATATGTCTGTTTTGAGTATCTATTGTCAACTCCAACTCCAGTCTTTCAAGAATCCAAGAATCCCCTATATCAacaacagcaacattttctctcagcctcatggcaaaatgtgtaaaatagctTGAGATTAGCTATACAATTGCGAATttatctctctgccccatggcaaaaatcCTAAGACAACATTCATTTTGGGTGATGGTCGGACCTTGCGGGTGAAAATGTGCTACGTCACTGGTCACCCCACTATGTATAGTGAAACATATTGCTTAGTCTACCTTTAAAAGTAATCTTAGACCTAGATTCAACCAGATCAAGTCTTAATGAGCGATAGCAGACTACCGCATAGCAGAGATTTTAGCGGTGTTGGAGGTGGAACTGCATTGGAGCCATCAAATCGGTGAGCAACTGCTCTTGCGACCTTTGTCACGGAGTCACACCCACCCCACTCGCAttagaagttcagaacgagaaagtaaaagtgtaggctatatagaaattaTTACGCTCAAATGTAAAAATCATTAAAAGAAAATTATGAGGatttctatcatcctaatggaggtgtagattacatctcacattccagtgttagaccttgtaaacaaggctgcatgggatttctgttaatgcgactccgtgcagccaatggcaatgtccacttTAGGTATGATGCCACgagccgcttgtggatttgacagttCTAATGCAGTTCCACCGGCAAAACAACTGCTATGCAGATGTGGGCTAAAGGagatctgattgaatagagcccacaTTTACATTGTTGTGTGCCGTTCTGTATAGTGGATATTCAATTAGCTCAAACTGTTCTTGTTTTGTAAATGTTGGTCCATGTAATGTTGGTATCAATAAAGAAATTACA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1225711 True 2511 lncRNA 0.37 2 44879438 44882247

Neighbor

gene id symbol gene type direction distance location
plekhb1 plekhb1 coding downstream 269128 44607162 ~ 44610310 (-)
LOC110537661 LOC101073377 coding downstream 278289 44546519 ~ 44601149 (-)
LOC118937885 NA coding downstream 310298 44564224 ~ 44569140 (-)
nova1 LOC106567594 coding downstream 360216 44479843 ~ 44519222 (-)
alkbh6 alkbh6 coding downstream 405979 44456976 ~ 44473459 (-)
LOC110537668 LOC106603713 coding upstream 1546 44883793 ~ 44965601 (-)
LOC110537669 LOC106567584 coding upstream 89751 44971998 ~ 45021139 (-)
LOC118937886 NA coding upstream 140577 45022824 ~ 45026146 (-)
LOC110537671 LOC106567583 coding upstream 147842 45030089 ~ 45072800 (-)
gria4b LOC106567580 coding upstream 251597 45133844 ~ 45296904 (-)
G1076674 NA non-coding downstream 59046 44815472 ~ 44820392 (-)
G1076648 LOC106567588 non-coding downstream 111990 44760842 ~ 44767448 (-)
G1076610 NA non-coding downstream 145991 44704229 ~ 44733447 (-)
G1076588 NA non-coding downstream 181592 44692862 ~ 44697846 (-)
G1076549 NA non-coding downstream 276144 44602316 ~ 44603294 (-)
G1076821 NA non-coding upstream 203514 45085761 ~ 45114971 (-)
G1076828 NA non-coding upstream 224226 45106473 ~ 45108160 (-)
G1076827 NA non-coding upstream 227140 45109387 ~ 45110929 (-)
G1076460 NA other downstream 424168 44454648 ~ 44455270 (-)
G1075509 NA other downstream 1105013 43774064 ~ 43774425 (-)
G1075399 NA other downstream 1218601 43660559 ~ 43660837 (-)
G1075335 NA other downstream 1315198 43563785 ~ 43564240 (-)
G1078323 LOC106567565 other upstream 1320357 46202604 ~ 46206088 (-)
G1078783 NA other upstream 1934196 46816443 ~ 46817065 (-)
LOC110537706 LOC106567549 other upstream 3032304 47911648 ~ 47942039 (-)
G1081055 NA other upstream 3536174 48418421 ~ 48418884 (-)

Expression


Co-expression Network