G1076827


Basic Information

Item Value
gene id G1076827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 45109387 ~ 45110929 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1225858
GTGATCTCAAAAAGCACCTGTAGCACAGCACAAAGAATTGAAGCATAAAGAAGTTCCTAATTGTCTACAATGCATCTTCTGGTGATCTAGGCTTAAACAGAAGCAGCACAAGATGCCGGAGGAGCAGTGACATTGTGGGTTTGATCATGCATATTGGTCTCAAGATCTTTTTAGTAGCCTTTCTTCAAGCAGTATGTATAACAGCTTATATATATAACTTCATGTACATCTGTATTGAGCATTAATCCCAAATACACTCAAATAACACATACATTACTGTTGCACTAAAGTGTACTTCAGCAATAGGAAATTGTTGACGACAGCAAAGTGAAAGAAAGAGCAAAGGTGCGAGCAGGACTAAAACCACCTGTTGACATTCACTGAAGTAAACTGCTGCAAAACTTTGGAAAGCATTGACATTCATTTAAAAGGTTACACACCTGTTCATGAAATACTATTCCAAAGAAAGGAACTGTGCAAGCGTGGCATTTAAACCAGAcaggtcttttttttaaagaaggtcTATGATAATTACATTTGTGATGTTCACTGAAATCCCTTGCTGACAATAACATGCAGTGAACTATCTGAATCATAAATGTCTTAGAGGGGTATTACactttcaaatcaaagtttggcAGATGTTTTCAGACCTCAAAAGTAGTCTGGCGTCAAGGTGAAACTCCATCCCACGACGTAGTTGATgtctgaaaacatctgacaaGCTTTCATGAATGTGTAATATGTCCCTTTTAAATAACCATTAGACATCTGTGGTATTCACCTGGCTCACCAGAAGTACAAAACATGCACACCTGGAGTAATATTTCAGTCACTGTAATATGAATTAGTCACAGTGAAAAAGATAcaacacagcaaaatgtgaatTCAGTATAGAGGCATCGGTGTAGGTTCATATGTATGAGTAAGTCTTTCTTGTCAGTCACTCGACACTGCTCGCTCTATGGTAATTAACAGTCCCTCTTCACTGAAAGAGTTCACATATGAGCCGTGTCTTCCTTCCAAAAACCTTGGTTACATGAAGTAACCTTATAGTTTTCACTGATTATGCCATACAGTGAGTAAAACAACGACACGCAGGCAGCACTGGTGCAAACGAACATTATATTAGCGTATCTTTTTTTCAATAAATTATAAAAGATGCAGTCAAAACAATCAATTCAAGCAATCGTGGACATAGCTGAATAACTGCTTATTCTGATTAATGTGAATTCTCCACATTAGTCTACATTTTGTCAACAAGGAAACTGCTCTTGTGAAGTGTTCTTATCATGCATTTGACCTCAAATATACACttccattcaaaagtttggggtcacttagaaatgtccttgtttttgaaagaaaagcaaatgttttgtccattaaaataacatcaaactgatcagaaacacagtgtagacattgttaatgttgtaaatgaaaacggcagattttttttttaatggaatatctacatactgtaggcgtacagaggcccattatcagcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1225858 True 1512 lncRNA 0.37 2 45109387 45110929

Neighbor

gene id symbol gene type direction distance location
LOC110537671 LOC106567583 coding downstream 36587 45030089 ~ 45072800 (-)
LOC118937886 NA coding downstream 83241 45022824 ~ 45026146 (-)
LOC110537669 LOC106567584 coding downstream 88248 44971998 ~ 45021139 (-)
LOC110537668 LOC106603713 coding downstream 143786 44883793 ~ 44965601 (-)
plekhb1 plekhb1 coding downstream 499077 44607162 ~ 44610310 (-)
gria4b LOC106567580 coding upstream 22915 45133844 ~ 45296904 (-)
LOC110537675 LOC106567579 coding upstream 355575 45466504 ~ 45504876 (-)
LOC110537676 LOC106567578 coding upstream 404432 45515361 ~ 45527757 (-)
LOC110537678 LOC106567577 coding upstream 447147 45558076 ~ 45573323 (-)
LOC110537679 LOC106567575 coding upstream 479832 45590761 ~ 45644071 (-)
G1076828 NA non-coding downstream 1227 45106473 ~ 45108160 (-)
G1076713 NA non-coding downstream 227140 44879438 ~ 44882247 (-)
G1076674 NA non-coding downstream 288995 44815472 ~ 44820392 (-)
G1076844 NA non-coding upstream 9508 45120437 ~ 45120652 (-)
G1076849 NA non-coding upstream 19016 45129945 ~ 45130226 (-)
G1076850 NA non-coding upstream 19856 45130785 ~ 45131016 (-)
G1076851 NA non-coding upstream 20243 45131172 ~ 45131405 (-)
G1077006 NA non-coding upstream 244331 45355260 ~ 45355630 (-)
LOC110537661 LOC101073377 other downstream 508499 44546519 ~ 44601149 (-)
G1076460 NA other downstream 654117 44454648 ~ 44455270 (-)
G1075509 NA other downstream 1334962 43774064 ~ 43774425 (-)
G1075399 NA other downstream 1448550 43660559 ~ 43660837 (-)
G1075335 NA other downstream 1545147 43563785 ~ 43564240 (-)
G1078323 LOC106567565 other upstream 1091675 46202604 ~ 46206088 (-)
G1078783 NA other upstream 1705514 46816443 ~ 46817065 (-)
LOC110537706 LOC106567549 other upstream 2803622 47911648 ~ 47942039 (-)
G1081055 NA other upstream 3307492 48418421 ~ 48418884 (-)

Expression


Co-expression Network