G1077966



Basic Information


Item Value
gene id G1077966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 45469627 ~ 45470202 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1227079
acaacaacctaaaacctcttacctggaataagtctcatgttaaaaggaaccaccagctttcatatgttctcatgttctgagcaaggaacttaatcgttagcttttttacatggcacatattgcatttttactttcttctccaacacttttgtttttgtattatttttatttacaaataaatgtaaaaaaaaatggctgatttaatctgctttttttggtcctccaataatcgttataggtatcggcgttgaaaaatcataatcaattGACCTCTAGTATATATGGAAGTAGTTTAGTGCCTAAAAAATTTGTTAAaaggatacttcgggattttggcaatgaggacctttatctacttccccagagtcggaTGAAgtcatggataccattttacatctctcagatataggacacaCTTTAAAATAATCTtccttttaatacattttttgactGTCTGTTTTTCCTTCTACgagtctgttattcaatgtgtttctatgggctaatggcagtaaggccaaa

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1227079 True 519 lncRNA 0.33 2 45469627 45470202

Neighbor


gene id symbol gene type direction distance location
gria4b LOC106567580 coding downstream 172723 45133844 ~ 45296904 (-)
LOC110537671 LOC106567583 coding downstream 396827 45030089 ~ 45072800 (-)
LOC118937886 NA coding downstream 443481 45022824 ~ 45026146 (-)
LOC110537669 LOC106567584 coding downstream 448488 44971998 ~ 45021139 (-)
LOC110537668 LOC106603713 coding downstream 504026 44883793 ~ 44965601 (-)
LOC110537676 LOC106567578 coding upstream 45159 45515361 ~ 45527757 (-)
LOC110537678 LOC106567577 coding upstream 87874 45558076 ~ 45573323 (-)
LOC110537679 LOC106567575 coding upstream 120559 45590761 ~ 45644071 (-)
LOC110537682 LOC106567574 coding upstream 207176 45677378 ~ 45726321 (-)
LOC110538902 LOC106567602 coding upstream 262550 45732752 ~ 45815120 (-)
G1077959 NA non-coding downstream 7506 45461824 ~ 45462121 (-)
G1077078 NA non-coding downstream 71297 45398006 ~ 45398330 (-)
G1077076 LOC106607612 non-coding downstream 71865 45397545 ~ 45397762 (-)
G1077073 LOC106564063 non-coding downstream 72744 45396665 ~ 45396883 (-)
G1077071 NA non-coding downstream 74976 45394448 ~ 45394651 (-)
LOC110537675 LOC106567579 non-coding upstream 19635 45466504 ~ 45504876 (-)
G1077960 NA non-coding upstream 40863 45511065 ~ 45514278 (-)
G1078036 NA non-coding upstream 124655 45594857 ~ 45595153 (-)
G1078026 NA non-coding upstream 129978 45600180 ~ 45604384 (-)
G1078039 NA non-coding upstream 131779 45601981 ~ 45612597 (-)
LOC110537661 LOC101073377 other downstream 868739 44546519 ~ 44601149 (-)
G1076460 NA other downstream 1014357 44454648 ~ 44455270 (-)
G1075509 NA other downstream 1695202 43774064 ~ 43774425 (-)
G1075399 NA other downstream 1808790 43660559 ~ 43660837 (-)
G1078323 LOC106567565 other upstream 732402 46202604 ~ 46206088 (-)
G1078783 NA other upstream 1346241 46816443 ~ 46817065 (-)
LOC110537706 LOC106567549 other upstream 2444349 47911648 ~ 47942039 (-)
G1081055 NA other upstream 2948219 48418421 ~ 48418884 (-)
G1081571 NA other upstream 3431206 48901408 ~ 48905274 (-)

Expression



Co-expression Network