G1078031


Basic Information

Item Value
gene id G1078031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 45718881 ~ 45719339 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1227146
gTCAATTGAATTGTTTTTAATGCATTTATGTAATGTTTCTGATTTACAGCCATTTTTGGAAACCTTTATTAATAATAAGACACATCCTAGCGTTACTGTTTCCAGAGACACCGCTCCTCTTCCTTTTCTTTCACTGAGAAGTACTGAGACCATGggcatgttcattaggcaccaaatagaAGAAACAGACTAAAATGAACTGTGGGCACTCCTTGGACTTGAGAGAGGCTTATTTTCGTTTACATTCTAAAACGTTTTCAATTGTttgccctaatgaatacgacccaggaTTCTGTAGGTAATGTAATTGTCCCCAAAATAAATAGTTTCCATGCTAACGTTTAACAGAAATCTATTCAGTTCCCACTGCTGGCTCTAAAATATCCTTGTTAAATTGATCTTGAATGGAACTCTGCCATTTGAGTCTTTTAGCTTTCCTTACCCAGACAGCTCTTTCCT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1227146 True 459 lncRNA 0.37 1 45718881 45719339

Neighbor

gene id symbol gene type direction distance location
LOC110537679 LOC106567575 coding downstream 74810 45590761 ~ 45644071 (-)
LOC110537678 LOC106567577 coding downstream 145558 45558076 ~ 45573323 (-)
LOC110537676 LOC106567578 coding downstream 191124 45515361 ~ 45527757 (-)
LOC110537675 LOC106567579 coding downstream 214005 45466504 ~ 45504876 (-)
gria4b LOC106567580 coding downstream 421977 45133844 ~ 45296904 (-)
LOC110538902 LOC106567602 coding upstream 13413 45732752 ~ 45815120 (-)
LOC118937677 NA coding upstream 97515 45816854 ~ 45820106 (-)
LOC110537687 tiprl coding upstream 148772 45868111 ~ 45878506 (-)
LOC110537691 LOC106567568 coding upstream 298044 46017383 ~ 46023676 (-)
foxr1 LOC106567616 coding upstream 522191 46241530 ~ 46243978 (-)
G1078032 NA non-coding downstream 809 45717786 ~ 45718072 (-)
G1078072 NA non-coding downstream 21276 45697383 ~ 45697605 (-)
G1078040 NA non-coding downstream 105508 45606186 ~ 45613373 (-)
G1078039 NA non-coding downstream 106284 45601981 ~ 45612597 (-)
G1078026 NA non-coding downstream 114497 45600180 ~ 45604384 (-)
LOC110537682 LOC106567574 non-coding upstream 5745 45677378 ~ 45726321 (-)
G1078096 NA non-coding upstream 50105 45769444 ~ 45769676 (-)
G1078097 NA non-coding upstream 53134 45772473 ~ 45772865 (-)
G1078117 NA non-coding upstream 122777 45842116 ~ 45843254 (-)
LOC110537661 LOC101073377 other downstream 1117993 44546519 ~ 44601149 (-)
G1076460 NA other downstream 1263611 44454648 ~ 44455270 (-)
G1075509 NA other downstream 1944456 43774064 ~ 43774425 (-)
G1075399 NA other downstream 2058044 43660559 ~ 43660837 (-)
G1078323 LOC106567565 other upstream 483265 46202604 ~ 46206088 (-)
G1078783 NA other upstream 1097104 46816443 ~ 46817065 (-)
LOC110537706 LOC106567549 other upstream 2195212 47911648 ~ 47942039 (-)
G1081055 NA other upstream 2699082 48418421 ~ 48418884 (-)
G1081571 NA other upstream 3182069 48901408 ~ 48905274 (-)

Expression


Co-expression Network