Gene
RNA
| Item | Value |
|---|---|
| gene id | G1078096 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 45769444 ~ 45769676 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1227225 | True | 233 | lncRNA | 0.46 | 1 | 45769444 | 45769676 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537682 | LOC106567574 | coding | downstream | 43123 | 45677378 ~ 45726321 (-) |
| LOC110537679 | LOC106567575 | coding | downstream | 125373 | 45590761 ~ 45644071 (-) |
| LOC110537678 | LOC106567577 | coding | downstream | 196121 | 45558076 ~ 45573323 (-) |
| LOC110537676 | LOC106567578 | coding | downstream | 241687 | 45515361 ~ 45527757 (-) |
| LOC110537675 | LOC106567579 | coding | downstream | 264568 | 45466504 ~ 45504876 (-) |
| LOC118937677 | NA | coding | upstream | 47178 | 45816854 ~ 45820106 (-) |
| LOC110537687 | tiprl | coding | upstream | 98435 | 45868111 ~ 45878506 (-) |
| LOC110537691 | LOC106567568 | coding | upstream | 247707 | 46017383 ~ 46023676 (-) |
| foxr1 | LOC106567616 | coding | upstream | 471854 | 46241530 ~ 46243978 (-) |
| LOC110537697 | gatsl2 | coding | upstream | 552671 | 46322347 ~ 46343466 (-) |
| LOC110538902 | LOC106567602 | non-coding | downstream | 3361 | 45732752 ~ 45815120 (-) |
| G1078031 | NA | non-coding | downstream | 50105 | 45718881 ~ 45719339 (-) |
| G1078032 | NA | non-coding | downstream | 51372 | 45717786 ~ 45718072 (-) |
| G1078072 | NA | non-coding | downstream | 71839 | 45697383 ~ 45697605 (-) |
| G1078097 | NA | non-coding | upstream | 2797 | 45772473 ~ 45772865 (-) |
| G1078117 | NA | non-coding | upstream | 72440 | 45842116 ~ 45843254 (-) |
| G1078085 | LOC106567570 | non-coding | upstream | 77121 | 45846797 ~ 45847092 (-) |
| G1078083 | LOC106567570 | non-coding | upstream | 77977 | 45847653 ~ 45851731 (-) |
| G1078119 | NA | non-coding | upstream | 82820 | 45852496 ~ 45852726 (-) |
| gria4b | LOC106567580 | other | downstream | 616107 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 1168556 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 1314174 | 44454648 ~ 44455270 (-) |
| G1075509 | NA | other | downstream | 1995019 | 43774064 ~ 43774425 (-) |
| G1075399 | NA | other | downstream | 2108607 | 43660559 ~ 43660837 (-) |
| G1078323 | LOC106567565 | other | upstream | 432928 | 46202604 ~ 46206088 (-) |
| G1078783 | NA | other | upstream | 1046767 | 46816443 ~ 46817065 (-) |
| LOC110537706 | LOC106567549 | other | upstream | 2144875 | 47911648 ~ 47942039 (-) |
| G1081055 | NA | other | upstream | 2648745 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 3131732 | 48901408 ~ 48905274 (-) |
