Gene
RNA
| Item | Value |
|---|---|
| gene id | G1078167 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 45936773 ~ 45937764 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hepatocyte cell adhesion molecule-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1227305 | True | 887 | lncRNA | 0.43 | 2 | 45936773 | 45937764 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537687 | tiprl | coding | downstream | 58267 | 45868111 ~ 45878506 (-) |
| LOC118937677 | NA | coding | downstream | 116667 | 45816854 ~ 45820106 (-) |
| LOC110538902 | LOC106567602 | coding | downstream | 121653 | 45732752 ~ 45815120 (-) |
| LOC110537682 | LOC106567574 | coding | downstream | 210452 | 45677378 ~ 45726321 (-) |
| LOC110537679 | LOC106567575 | coding | downstream | 292702 | 45590761 ~ 45644071 (-) |
| LOC110537691 | LOC106567568 | coding | upstream | 79619 | 46017383 ~ 46023676 (-) |
| foxr1 | LOC106567616 | coding | upstream | 303766 | 46241530 ~ 46243978 (-) |
| LOC110537697 | gatsl2 | coding | upstream | 384583 | 46322347 ~ 46343466 (-) |
| LOC118937925 | NA | coding | upstream | 424564 | 46362328 ~ 46362459 (-) |
| LOC110537698 | LOC106567561 | coding | upstream | 444738 | 46382502 ~ 46689581 (-) |
| G1078148 | NA | non-coding | downstream | 16684 | 45900425 ~ 45920089 (-) |
| G1078120 | NA | non-coding | downstream | 80124 | 45856262 ~ 45856649 (-) |
| G1078119 | NA | non-coding | downstream | 84047 | 45852496 ~ 45852726 (-) |
| G1078083 | LOC106567570 | non-coding | downstream | 85042 | 45847653 ~ 45851731 (-) |
| G1078085 | LOC106567570 | non-coding | downstream | 89681 | 45846797 ~ 45847092 (-) |
| G1078160 | NA | non-coding | upstream | 26255 | 45964019 ~ 46008083 (-) |
| G1078240 | NA | non-coding | upstream | 140355 | 46078119 ~ 46081042 (-) |
| G1078306 | NA | non-coding | upstream | 255154 | 46192918 ~ 46290067 (-) |
| G1078342 | ncf1 | non-coding | upstream | 288627 | 46226391 ~ 46284095 (-) |
| gria4b | LOC106567580 | other | downstream | 783436 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 1335885 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 1481503 | 44454648 ~ 44455270 (-) |
| G1075509 | NA | other | downstream | 2162348 | 43774064 ~ 43774425 (-) |
| G1075399 | NA | other | downstream | 2275936 | 43660559 ~ 43660837 (-) |
| G1078323 | LOC106567565 | other | upstream | 264840 | 46202604 ~ 46206088 (-) |
| G1078783 | NA | other | upstream | 878679 | 46816443 ~ 46817065 (-) |
| LOC110537706 | LOC106567549 | other | upstream | 1976787 | 47911648 ~ 47942039 (-) |
| G1081055 | NA | other | upstream | 2480657 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 2963644 | 48901408 ~ 48905274 (-) |
