Gene
RNA
| Item | Value |
|---|---|
| gene id | G1078543 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 46518987 ~ 46519204 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1227708 | True | 218 | lncRNA | 0.39 | 1 | 46518987 | 46519204 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937925 | NA | coding | downstream | 156528 | 46362328 ~ 46362459 (-) |
| LOC110537697 | gatsl2 | coding | downstream | 175521 | 46322347 ~ 46343466 (-) |
| foxr1 | LOC106567616 | coding | downstream | 275009 | 46241530 ~ 46243978 (-) |
| LOC110537691 | LOC106567568 | coding | downstream | 495311 | 46017383 ~ 46023676 (-) |
| LOC110537687 | tiprl | coding | downstream | 640481 | 45868111 ~ 45878506 (-) |
| LOC110537699 | LOC106567556 | coding | upstream | 392253 | 46911457 ~ 47297035 (-) |
| LOC110537700 | LOC106567555 | coding | upstream | 1107452 | 47626656 ~ 47658365 (-) |
| LOC110537701 | LOC106567554 | coding | upstream | 1143840 | 47663044 ~ 47711376 (-) |
| LOC110537702 | LOC106567552 | coding | upstream | 1193806 | 47712366 ~ 47791030 (-) |
| LOC110537706 | LOC106567549 | coding | upstream | 1392444 | 47911648 ~ 47942039 (-) |
| G1078363 | NA | non-coding | downstream | 186869 | 46315574 ~ 46332118 (-) |
| G1078384 | NA | non-coding | downstream | 213267 | 46305470 ~ 46305720 (-) |
| G1078381 | NA | non-coding | downstream | 215288 | 46303494 ~ 46303699 (-) |
| G1078380 | NA | non-coding | downstream | 215664 | 46302936 ~ 46303323 (-) |
| G1078374 | NA | non-coding | downstream | 226018 | 46292746 ~ 46292969 (-) |
| G1078551 | NA | non-coding | upstream | 10456 | 46529660 ~ 46529878 (-) |
| G1078563 | NA | non-coding | upstream | 36291 | 46555495 ~ 46555908 (-) |
| G1078611 | NA | non-coding | upstream | 108717 | 46627921 ~ 46628240 (-) |
| G1078616 | NA | non-coding | upstream | 114657 | 46633861 ~ 46634092 (-) |
| G1078630 | NA | non-coding | upstream | 129872 | 46649076 ~ 46649289 (-) |
| G1078323 | LOC106567565 | other | downstream | 312899 | 46202604 ~ 46206088 (-) |
| gria4b | LOC106567580 | other | downstream | 1365650 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 1918099 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 2063717 | 44454648 ~ 44455270 (-) |
| G1075509 | NA | other | downstream | 2744562 | 43774064 ~ 43774425 (-) |
| G1078783 | NA | other | upstream | 297239 | 46816443 ~ 46817065 (-) |
| G1081055 | NA | other | upstream | 1899217 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 2382204 | 48901408 ~ 48905274 (-) |
| G1081813 | NA | other | upstream | 2468808 | 48988012 ~ 48988353 (-) |
