Gene
RNA
| Item | Value |
|---|---|
| gene id | G1078563 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 46555495 ~ 46555908 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1227728 | True | 414 | lncRNA | 0.51 | 1 | 46555495 | 46555908 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937925 | NA | coding | downstream | 193036 | 46362328 ~ 46362459 (-) |
| LOC110537697 | gatsl2 | coding | downstream | 212029 | 46322347 ~ 46343466 (-) |
| foxr1 | LOC106567616 | coding | downstream | 311517 | 46241530 ~ 46243978 (-) |
| LOC110537691 | LOC106567568 | coding | downstream | 531819 | 46017383 ~ 46023676 (-) |
| LOC110537687 | tiprl | coding | downstream | 676989 | 45868111 ~ 45878506 (-) |
| LOC110537699 | LOC106567556 | coding | upstream | 355549 | 46911457 ~ 47297035 (-) |
| LOC110537700 | LOC106567555 | coding | upstream | 1070748 | 47626656 ~ 47658365 (-) |
| LOC110537701 | LOC106567554 | coding | upstream | 1107136 | 47663044 ~ 47711376 (-) |
| LOC110537702 | LOC106567552 | coding | upstream | 1157102 | 47712366 ~ 47791030 (-) |
| LOC110537706 | LOC106567549 | coding | upstream | 1355740 | 47911648 ~ 47942039 (-) |
| G1078551 | NA | non-coding | downstream | 25617 | 46529660 ~ 46529878 (-) |
| G1078543 | NA | non-coding | downstream | 36291 | 46518987 ~ 46519204 (-) |
| G1078363 | NA | non-coding | downstream | 223377 | 46315574 ~ 46332118 (-) |
| G1078384 | NA | non-coding | downstream | 249775 | 46305470 ~ 46305720 (-) |
| G1078381 | NA | non-coding | downstream | 251796 | 46303494 ~ 46303699 (-) |
| G1078611 | NA | non-coding | upstream | 72013 | 46627921 ~ 46628240 (-) |
| G1078616 | NA | non-coding | upstream | 77953 | 46633861 ~ 46634092 (-) |
| G1078630 | NA | non-coding | upstream | 93168 | 46649076 ~ 46649289 (-) |
| G1078661 | NA | non-coding | upstream | 139859 | 46695767 ~ 46730583 (-) |
| G1078721 | NA | non-coding | upstream | 215321 | 46771229 ~ 46771500 (-) |
| G1078323 | LOC106567565 | other | downstream | 349407 | 46202604 ~ 46206088 (-) |
| gria4b | LOC106567580 | other | downstream | 1402158 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 1954607 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 2100225 | 44454648 ~ 44455270 (-) |
| G1075509 | NA | other | downstream | 2781070 | 43774064 ~ 43774425 (-) |
| G1078783 | NA | other | upstream | 260535 | 46816443 ~ 46817065 (-) |
| G1081055 | NA | other | upstream | 1862513 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 2345500 | 48901408 ~ 48905274 (-) |
| G1081813 | NA | other | upstream | 2432104 | 48988012 ~ 48988353 (-) |
