G1078661


Basic Information

Item Value
gene id G1078661
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 46695767 ~ 46730583 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1227828
ctcaagctcattaccataacgcaatgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgctagctctcaagcttagccttttgttaacaacactgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaagcatttgtgtaacagtatttatagctagcgtagcatttagcattagcattcagcaggcaacattttcacaaaagccagaaaatcattcaaataaaatcatttacctttgaagaacttcagatgttttcaatgaggagactctgttagatagcaaatgttcagtttttcctgaaagattatttgtttaggagaaatcgctccgtttggtgcgtcacgtttggctaccaaaaaaaaacgaaaattcagtcatcaaaacgccgaacttttttccaaattaactccataatatcgactgaaacatggcaaacgttgtttagaatcaatcctcaaggtgtttttcacatatctcttcattgatacatcgttcttggaaaaatgctttctctcctgaatcccaggagaaaatgcccgcacctgaagattacgcacaaatttagacaaaggacaccgggcggacctctggaaaatgtagtctcttatggccaatcttccaatgatatgcctacaaatacgtcataatgctgctaagaccttgggcgaacgacagaaagtgtaggctcattcgttgcgcaatcacagccatataaggagagaatggaaaacagagcttcagaaattctgctaattcctgggtgatgcatcatcttggtttcgcctgtagaatgagttctggggcacttacagacaaaatctttgcagattctgaaacttcagagtgttttctttccaaaactgtcaagaatatgcatagtcgagcatcttttcgtgacaaaatatcgcgcttaaaacgggaacgttttttatccaaaaatgaaatagcgcccctagagctctaagaggtttaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1227828 True 995 lncRNA 0.38 2 46695767 46730583

Neighbor

gene id symbol gene type direction distance location
LOC110537698 LOC106567561 coding downstream 6186 46382502 ~ 46689581 (-)
LOC118937925 NA coding downstream 333308 46362328 ~ 46362459 (-)
LOC110537697 gatsl2 coding downstream 352301 46322347 ~ 46343466 (-)
foxr1 LOC106567616 coding downstream 451789 46241530 ~ 46243978 (-)
LOC110537691 LOC106567568 coding downstream 672091 46017383 ~ 46023676 (-)
LOC110537699 LOC106567556 coding upstream 180874 46911457 ~ 47297035 (-)
LOC110537700 LOC106567555 coding upstream 896073 47626656 ~ 47658365 (-)
LOC110537701 LOC106567554 coding upstream 932461 47663044 ~ 47711376 (-)
LOC110537702 LOC106567552 coding upstream 982427 47712366 ~ 47791030 (-)
LOC110537706 LOC106567549 coding upstream 1181065 47911648 ~ 47942039 (-)
G1078630 NA non-coding downstream 46478 46649076 ~ 46649289 (-)
G1078616 NA non-coding downstream 61675 46633861 ~ 46634092 (-)
G1078611 NA non-coding downstream 67527 46627921 ~ 46628240 (-)
G1078563 NA non-coding downstream 139859 46555495 ~ 46555908 (-)
G1078551 NA non-coding downstream 165889 46529660 ~ 46529878 (-)
G1078721 NA non-coding upstream 40646 46771229 ~ 46771500 (-)
G1078728 NA non-coding upstream 48766 46779349 ~ 46779596 (-)
G1078736 NA non-coding upstream 55705 46786288 ~ 46786517 (-)
G1078742 NA non-coding upstream 58406 46788989 ~ 46789214 (-)
G1078758 NA non-coding upstream 66834 46797417 ~ 46798153 (-)
G1078323 LOC106567565 other downstream 489679 46202604 ~ 46206088 (-)
gria4b LOC106567580 other downstream 1542430 45133844 ~ 45296904 (-)
LOC110537661 LOC101073377 other downstream 2094879 44546519 ~ 44601149 (-)
G1076460 NA other downstream 2240497 44454648 ~ 44455270 (-)
G1075509 NA other downstream 2921342 43774064 ~ 43774425 (-)
G1078783 NA other upstream 85860 46816443 ~ 46817065 (-)
G1081055 NA other upstream 1687838 48418421 ~ 48418884 (-)
G1081571 NA other upstream 2170825 48901408 ~ 48905274 (-)
G1081813 NA other upstream 2257429 48988012 ~ 48988353 (-)

Expression


Co-expression Network