Gene
RNA
| Item | Value |
|---|---|
| gene id | G1078728 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 46779349 ~ 46779596 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1227906 | True | 248 | lncRNA | 0.35 | 1 | 46779349 | 46779596 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537698 | LOC106567561 | coding | downstream | 89768 | 46382502 ~ 46689581 (-) |
| LOC118937925 | NA | coding | downstream | 416890 | 46362328 ~ 46362459 (-) |
| LOC110537697 | gatsl2 | coding | downstream | 435883 | 46322347 ~ 46343466 (-) |
| foxr1 | LOC106567616 | coding | downstream | 535371 | 46241530 ~ 46243978 (-) |
| LOC110537691 | LOC106567568 | coding | downstream | 755673 | 46017383 ~ 46023676 (-) |
| LOC110537699 | LOC106567556 | coding | upstream | 131861 | 46911457 ~ 47297035 (-) |
| LOC110537700 | LOC106567555 | coding | upstream | 847060 | 47626656 ~ 47658365 (-) |
| LOC110537701 | LOC106567554 | coding | upstream | 883448 | 47663044 ~ 47711376 (-) |
| LOC110537702 | LOC106567552 | coding | upstream | 933414 | 47712366 ~ 47791030 (-) |
| LOC110537706 | LOC106567549 | coding | upstream | 1132052 | 47911648 ~ 47942039 (-) |
| G1078721 | NA | non-coding | downstream | 7849 | 46771229 ~ 46771500 (-) |
| G1078661 | NA | non-coding | downstream | 48766 | 46695767 ~ 46730583 (-) |
| G1078630 | NA | non-coding | downstream | 130060 | 46649076 ~ 46649289 (-) |
| G1078616 | NA | non-coding | downstream | 145257 | 46633861 ~ 46634092 (-) |
| G1078611 | NA | non-coding | downstream | 151109 | 46627921 ~ 46628240 (-) |
| G1078736 | NA | non-coding | upstream | 6692 | 46786288 ~ 46786517 (-) |
| G1078742 | NA | non-coding | upstream | 9393 | 46788989 ~ 46789214 (-) |
| G1078758 | NA | non-coding | upstream | 17821 | 46797417 ~ 46798153 (-) |
| G1078762 | NA | non-coding | upstream | 22340 | 46801936 ~ 46802202 (-) |
| G1078796 | NA | non-coding | upstream | 45869 | 46825465 ~ 46825678 (-) |
| G1078323 | LOC106567565 | other | downstream | 573261 | 46202604 ~ 46206088 (-) |
| gria4b | LOC106567580 | other | downstream | 1626012 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 2178461 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 2324079 | 44454648 ~ 44455270 (-) |
| G1075509 | NA | other | downstream | 3004924 | 43774064 ~ 43774425 (-) |
| G1078783 | NA | other | upstream | 36847 | 46816443 ~ 46817065 (-) |
| G1081055 | NA | other | upstream | 1638825 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 2121812 | 48901408 ~ 48905274 (-) |
| G1081813 | NA | other | upstream | 2208416 | 48988012 ~ 48988353 (-) |
