Gene
RNA
| Item | Value |
|---|---|
| gene id | G1079234 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 46975055 ~ 46979973 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1228437 | True | 260 | lncRNA | 0.43 | 2 | 46975055 | 46979973 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537698 | LOC106567561 | coding | downstream | 285474 | 46382502 ~ 46689581 (-) |
| LOC118937925 | NA | coding | downstream | 612596 | 46362328 ~ 46362459 (-) |
| LOC110537697 | gatsl2 | coding | downstream | 631589 | 46322347 ~ 46343466 (-) |
| foxr1 | LOC106567616 | coding | downstream | 731077 | 46241530 ~ 46243978 (-) |
| LOC110537691 | LOC106567568 | coding | downstream | 951379 | 46017383 ~ 46023676 (-) |
| LOC110537700 | LOC106567555 | coding | upstream | 646683 | 47626656 ~ 47658365 (-) |
| LOC110537701 | LOC106567554 | coding | upstream | 683071 | 47663044 ~ 47711376 (-) |
| LOC110537702 | LOC106567552 | coding | upstream | 733037 | 47712366 ~ 47791030 (-) |
| LOC110537706 | LOC106567549 | coding | upstream | 931675 | 47911648 ~ 47942039 (-) |
| LOC110538906 | ovol2 | coding | upstream | 2241928 | 49221901 ~ 49228404 (-) |
| G1079210 | NA | non-coding | downstream | 20935 | 46936415 ~ 46954120 (-) |
| G1079161 | NA | non-coding | downstream | 100719 | 46873979 ~ 46874336 (-) |
| G1079157 | NA | non-coding | downstream | 105192 | 46869649 ~ 46869863 (-) |
| G1078796 | NA | non-coding | downstream | 149377 | 46825465 ~ 46825678 (-) |
| G1078762 | NA | non-coding | downstream | 172853 | 46801936 ~ 46802202 (-) |
| G1079345 | NA | non-coding | upstream | 161549 | 47141522 ~ 47142714 (-) |
| G1079390 | NA | non-coding | upstream | 210809 | 47190782 ~ 47191254 (-) |
| G1079391 | NA | non-coding | upstream | 211357 | 47191330 ~ 47191558 (-) |
| G1079506 | NA | non-coding | upstream | 366664 | 47346637 ~ 47356554 (-) |
| G1079513 | NA | non-coding | upstream | 378445 | 47358418 ~ 47358646 (-) |
| G1078783 | NA | other | downstream | 157990 | 46816443 ~ 46817065 (-) |
| G1078323 | LOC106567565 | other | downstream | 768967 | 46202604 ~ 46206088 (-) |
| gria4b | LOC106567580 | other | downstream | 1821718 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 2374167 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 2519785 | 44454648 ~ 44455270 (-) |
| G1081055 | NA | other | upstream | 1438448 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 1921435 | 48901408 ~ 48905274 (-) |
| G1081813 | NA | other | upstream | 2008039 | 48988012 ~ 48988353 (-) |
| G1081829 | NA | other | upstream | 2029376 | 49009349 ~ 49010152 (-) |
