Gene
RNA
| Item | Value |
|---|---|
| gene id | G1079514 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 47359286 ~ 47359608 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1228725 | True | 323 | lncRNA | 0.44 | 1 | 47359286 | 47359608 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537699 | LOC106567556 | coding | downstream | 62251 | 46911457 ~ 47297035 (-) |
| LOC110537698 | LOC106567561 | coding | downstream | 669705 | 46382502 ~ 46689581 (-) |
| LOC118937925 | NA | coding | downstream | 996827 | 46362328 ~ 46362459 (-) |
| LOC110537697 | gatsl2 | coding | downstream | 1015820 | 46322347 ~ 46343466 (-) |
| foxr1 | LOC106567616 | coding | downstream | 1115308 | 46241530 ~ 46243978 (-) |
| LOC110537700 | LOC106567555 | coding | upstream | 267048 | 47626656 ~ 47658365 (-) |
| LOC110537701 | LOC106567554 | coding | upstream | 303436 | 47663044 ~ 47711376 (-) |
| LOC110537702 | LOC106567552 | coding | upstream | 353402 | 47712366 ~ 47791030 (-) |
| LOC110537706 | LOC106567549 | coding | upstream | 552040 | 47911648 ~ 47942039 (-) |
| LOC110538906 | ovol2 | coding | upstream | 1862293 | 49221901 ~ 49228404 (-) |
| G1079513 | NA | non-coding | downstream | 640 | 47358418 ~ 47358646 (-) |
| G1079506 | NA | non-coding | downstream | 2732 | 47346637 ~ 47356554 (-) |
| G1079391 | NA | non-coding | downstream | 167728 | 47191330 ~ 47191558 (-) |
| G1079390 | NA | non-coding | downstream | 168032 | 47190782 ~ 47191254 (-) |
| G1079345 | NA | non-coding | downstream | 216572 | 47141522 ~ 47142714 (-) |
| G1079516 | NA | non-coding | upstream | 2930 | 47362538 ~ 47365152 (-) |
| G1079534 | NA | non-coding | upstream | 13666 | 47373274 ~ 47373539 (-) |
| G1080102 | NA | non-coding | upstream | 173458 | 47533066 ~ 47533377 (-) |
| G1080115 | NA | non-coding | upstream | 186277 | 47545885 ~ 47546201 (-) |
| G1080117 | NA | non-coding | upstream | 187489 | 47547097 ~ 47547356 (-) |
| G1078783 | NA | other | downstream | 542221 | 46816443 ~ 46817065 (-) |
| G1078323 | LOC106567565 | other | downstream | 1153198 | 46202604 ~ 46206088 (-) |
| gria4b | LOC106567580 | other | downstream | 2205949 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 2758398 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 2904016 | 44454648 ~ 44455270 (-) |
| G1081055 | NA | other | upstream | 1058813 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 1541800 | 48901408 ~ 48905274 (-) |
| G1081813 | NA | other | upstream | 1628404 | 48988012 ~ 48988353 (-) |
| G1081829 | NA | other | upstream | 1649741 | 49009349 ~ 49010152 (-) |
