Gene
RNA
| Item | Value |
|---|---|
| gene id | G1079534 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 47373274 ~ 47373539 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1228745 | True | 266 | lncRNA | 0.37 | 1 | 47373274 | 47373539 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537699 | LOC106567556 | coding | downstream | 76239 | 46911457 ~ 47297035 (-) |
| LOC110537698 | LOC106567561 | coding | downstream | 683693 | 46382502 ~ 46689581 (-) |
| LOC118937925 | NA | coding | downstream | 1010815 | 46362328 ~ 46362459 (-) |
| LOC110537697 | gatsl2 | coding | downstream | 1029808 | 46322347 ~ 46343466 (-) |
| foxr1 | LOC106567616 | coding | downstream | 1129296 | 46241530 ~ 46243978 (-) |
| LOC110537700 | LOC106567555 | coding | upstream | 253117 | 47626656 ~ 47658365 (-) |
| LOC110537701 | LOC106567554 | coding | upstream | 289505 | 47663044 ~ 47711376 (-) |
| LOC110537702 | LOC106567552 | coding | upstream | 339471 | 47712366 ~ 47791030 (-) |
| LOC110537706 | LOC106567549 | coding | upstream | 538109 | 47911648 ~ 47942039 (-) |
| LOC110538906 | ovol2 | coding | upstream | 1848362 | 49221901 ~ 49228404 (-) |
| G1079516 | NA | non-coding | downstream | 8122 | 47362538 ~ 47365152 (-) |
| G1079514 | NA | non-coding | downstream | 13666 | 47359286 ~ 47359608 (-) |
| G1079513 | NA | non-coding | downstream | 14628 | 47358418 ~ 47358646 (-) |
| G1079506 | NA | non-coding | downstream | 16720 | 47346637 ~ 47356554 (-) |
| G1079391 | NA | non-coding | downstream | 181716 | 47191330 ~ 47191558 (-) |
| G1080102 | NA | non-coding | upstream | 159527 | 47533066 ~ 47533377 (-) |
| G1080115 | NA | non-coding | upstream | 172346 | 47545885 ~ 47546201 (-) |
| G1080117 | NA | non-coding | upstream | 173558 | 47547097 ~ 47547356 (-) |
| G1080121 | NA | non-coding | upstream | 179365 | 47552904 ~ 47553182 (-) |
| G1080125 | NA | non-coding | upstream | 181029 | 47554568 ~ 47554795 (-) |
| G1078783 | NA | other | downstream | 556209 | 46816443 ~ 46817065 (-) |
| G1078323 | LOC106567565 | other | downstream | 1167186 | 46202604 ~ 46206088 (-) |
| gria4b | LOC106567580 | other | downstream | 2219937 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 2772386 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 2918004 | 44454648 ~ 44455270 (-) |
| G1081055 | NA | other | upstream | 1044882 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 1527869 | 48901408 ~ 48905274 (-) |
| G1081813 | NA | other | upstream | 1614473 | 48988012 ~ 48988353 (-) |
| G1081829 | NA | other | upstream | 1635810 | 49009349 ~ 49010152 (-) |
