Gene
RNA
| Item | Value |
|---|---|
| gene id | G1080102 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 47533066 ~ 47533377 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1229348 | True | 312 | lncRNA | 0.41 | 1 | 47533066 | 47533377 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537699 | LOC106567556 | coding | downstream | 236031 | 46911457 ~ 47297035 (-) |
| LOC110537698 | LOC106567561 | coding | downstream | 843485 | 46382502 ~ 46689581 (-) |
| LOC118937925 | NA | coding | downstream | 1170607 | 46362328 ~ 46362459 (-) |
| LOC110537697 | gatsl2 | coding | downstream | 1189600 | 46322347 ~ 46343466 (-) |
| foxr1 | LOC106567616 | coding | downstream | 1289088 | 46241530 ~ 46243978 (-) |
| LOC110537700 | LOC106567555 | coding | upstream | 93279 | 47626656 ~ 47658365 (-) |
| LOC110537701 | LOC106567554 | coding | upstream | 129667 | 47663044 ~ 47711376 (-) |
| LOC110537702 | LOC106567552 | coding | upstream | 179633 | 47712366 ~ 47791030 (-) |
| LOC110537706 | LOC106567549 | coding | upstream | 378271 | 47911648 ~ 47942039 (-) |
| LOC110538906 | ovol2 | coding | upstream | 1688524 | 49221901 ~ 49228404 (-) |
| G1079534 | NA | non-coding | downstream | 159527 | 47373274 ~ 47373539 (-) |
| G1079516 | NA | non-coding | downstream | 167914 | 47362538 ~ 47365152 (-) |
| G1079514 | NA | non-coding | downstream | 173458 | 47359286 ~ 47359608 (-) |
| G1079513 | NA | non-coding | downstream | 174420 | 47358418 ~ 47358646 (-) |
| G1079506 | NA | non-coding | downstream | 176512 | 47346637 ~ 47356554 (-) |
| G1080115 | NA | non-coding | upstream | 12508 | 47545885 ~ 47546201 (-) |
| G1080117 | NA | non-coding | upstream | 13720 | 47547097 ~ 47547356 (-) |
| G1080121 | NA | non-coding | upstream | 19527 | 47552904 ~ 47553182 (-) |
| G1080125 | NA | non-coding | upstream | 21191 | 47554568 ~ 47554795 (-) |
| G1080126 | NA | non-coding | upstream | 22746 | 47556123 ~ 47556411 (-) |
| G1078783 | NA | other | downstream | 716001 | 46816443 ~ 46817065 (-) |
| G1078323 | LOC106567565 | other | downstream | 1326978 | 46202604 ~ 46206088 (-) |
| gria4b | LOC106567580 | other | downstream | 2379729 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 2932178 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 3077796 | 44454648 ~ 44455270 (-) |
| G1081055 | NA | other | upstream | 885044 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 1368031 | 48901408 ~ 48905274 (-) |
| G1081813 | NA | other | upstream | 1454635 | 48988012 ~ 48988353 (-) |
| G1081829 | NA | other | upstream | 1475972 | 49009349 ~ 49010152 (-) |
