Gene
RNA
| Item | Value |
|---|---|
| gene id | G1080115 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 47545885 ~ 47546201 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1229361 | True | 317 | lncRNA | 0.34 | 1 | 47545885 | 47546201 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537699 | LOC106567556 | coding | downstream | 248850 | 46911457 ~ 47297035 (-) |
| LOC110537698 | LOC106567561 | coding | downstream | 856304 | 46382502 ~ 46689581 (-) |
| LOC118937925 | NA | coding | downstream | 1183426 | 46362328 ~ 46362459 (-) |
| LOC110537697 | gatsl2 | coding | downstream | 1202419 | 46322347 ~ 46343466 (-) |
| foxr1 | LOC106567616 | coding | downstream | 1301907 | 46241530 ~ 46243978 (-) |
| LOC110537700 | LOC106567555 | coding | upstream | 80455 | 47626656 ~ 47658365 (-) |
| LOC110537701 | LOC106567554 | coding | upstream | 116843 | 47663044 ~ 47711376 (-) |
| LOC110537702 | LOC106567552 | coding | upstream | 166809 | 47712366 ~ 47791030 (-) |
| LOC110537706 | LOC106567549 | coding | upstream | 365447 | 47911648 ~ 47942039 (-) |
| LOC110538906 | ovol2 | coding | upstream | 1675700 | 49221901 ~ 49228404 (-) |
| G1080102 | NA | non-coding | downstream | 12508 | 47533066 ~ 47533377 (-) |
| G1079534 | NA | non-coding | downstream | 172346 | 47373274 ~ 47373539 (-) |
| G1079516 | NA | non-coding | downstream | 180733 | 47362538 ~ 47365152 (-) |
| G1079514 | NA | non-coding | downstream | 186277 | 47359286 ~ 47359608 (-) |
| G1079513 | NA | non-coding | downstream | 187239 | 47358418 ~ 47358646 (-) |
| G1080117 | NA | non-coding | upstream | 896 | 47547097 ~ 47547356 (-) |
| G1080121 | NA | non-coding | upstream | 6703 | 47552904 ~ 47553182 (-) |
| G1080125 | NA | non-coding | upstream | 8367 | 47554568 ~ 47554795 (-) |
| G1080126 | NA | non-coding | upstream | 9922 | 47556123 ~ 47556411 (-) |
| G1080128 | NA | non-coding | upstream | 12385 | 47558586 ~ 47631597 (-) |
| G1078783 | NA | other | downstream | 728820 | 46816443 ~ 46817065 (-) |
| G1078323 | LOC106567565 | other | downstream | 1339797 | 46202604 ~ 46206088 (-) |
| gria4b | LOC106567580 | other | downstream | 2392548 | 45133844 ~ 45296904 (-) |
| LOC110537661 | LOC101073377 | other | downstream | 2944997 | 44546519 ~ 44601149 (-) |
| G1076460 | NA | other | downstream | 3090615 | 44454648 ~ 44455270 (-) |
| G1081055 | NA | other | upstream | 872220 | 48418421 ~ 48418884 (-) |
| G1081571 | NA | other | upstream | 1355207 | 48901408 ~ 48905274 (-) |
| G1081813 | NA | other | upstream | 1441811 | 48988012 ~ 48988353 (-) |
| G1081829 | NA | other | upstream | 1463148 | 49009349 ~ 49010152 (-) |
