G1081571


Basic Information

Item Value
gene id G1081571
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 48901408 ~ 48905274 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1230892
CTTCATCAAATGCTTTATTACAAACCAAAACAGTACTTATTCAGATATTGTACAAATATACCATTTTCACTCGAGAGGGAGGTATATATATGGCCTTTTTGGTTTACCACAACTCAAAGTAACTGCATGGCATTGTCAATCAAAGAAAATAGAGTGAGAGAAAACATATTGTCCTTCTAACGGTGTCGGTGTGTTAAAAGGACTTAATGCAAGTAAAACACAAACAGAGGGGACATTAAGAAAGTACAAAGTACTTCAGATTGAATACTTAACCCAAACAAAGAACCTCAAAATGAATTTCTAAAAAATTATAAAACCTTCCTTATTTACAGTCATAGTATTTGTTTTAAAatgattatttatatatttaattgAGGCAAAAATACCGTTTTGTTCTTTCTCCAGTTAAGTATCAGTGACATGCATATCCATCGTTTTTCAGCTTTGGATGGGTTCTTTCTCCCTTTAACGTTACACTGGTTGGTTTCTAACAGAGATGTCCCATCACTCAACCGATAGTGGAGGTCTTCAGAGTAGACAGACACTAATGAATGACATCAAGATGCACGTTTTGTACTAGCTAAATGAGGGTAATGTCCTTTGGGAGTCGGCACATGGTGAAAAGGCAATGTAATGCCTGTGGTTCACGTTATTCCAATTCCCAGCATGGTTTGGAGCAGACGGTCTTTCCATTCCTCCTGTCTGCCAAGAAAGAGGTTCCAATGAAAAAGGGTGGAAATCTTAATGATTCAGGACGCAGAGCGCTCCGCCACGGCTGAATCAGATGGGCAGCGAAAGGTAGCTAGCAAACCAGGTAAAGAGCCACCAGGATAACTGGAAAATCACTCCCGGTACGTATCACACCCCATCAAACGTCCATAAAAGCTGCATTCAATCAGCCAATAGGCCTCTCTGTATTGGCTTTCAGCAGTATTATGGGAAATTCGAAGAGGGTTGTGATGGGTAATCACTAATAAGGAGCTCTCACTCAGGTGTCATCCTCTCATCTTGCCACTCATCCGTCTCCTGGTTTAAATGAGCTTTTCAAACAGCACTGGGCAAGCTAGAAGTACTCAAGAGACTCACCGAGACAAAGTTGCTGATTTATTTTCGCTCTTGGAACTGCCCACGATTCAGGAGATAATTTCACCTTCCCTACTGGAGTGACGttctaaaaaaattaaataatactAAAGGTGAATCTGGTGGATTTCAACCAGGCATGAACCAAAGCCAGGTTAACTTGTCATGTTTTTTCAAGGAGTGTAGACTCCTGAGTACCCCTGTCCTGGCTCCAACCATTTCAGAGGCCAGAGGGTGAGTGCCCTCTGCACTGTGGGGTGAGTAGAGCCCGCTCCCTCCTGGGTGATCTAAGATGAGTGTGCTGGTTTATCCTGGAGGGCGCCACAGCATCATTCAATTCAAATACCTCCTGACATCTCATCCATCACATGAACTGTACTGCGAGGGAGCCAAAATAAGGGGGTGTCTCTCCGGGAGGAAGCAGTCATAATGCTGAAGGACCAACGTGCTGGCAGACAAGAATATCGCTATGCAAAAGTGACGCCTTTGGATCTGAGGAGAGCTCAGGCAAAAATTGACAATTAAGTCAGAGAGAAGGATAGGGCATAATCCAACTTTCAGCCGGGACATTTTATTGAGTTTGAGTTTAAATTCTGTGTTTGGCCACCATGAAGAGACTTTGATAGAATGATTTGAGTTTGGCTGAAACTAGTATGACTACATGGCTAAACAAAATCACTCAAAGCAATTGTCCTTTTCATTCCTCATCTGCTTGAATAGAATCAAATCTCAGATGTACCGTATCGTAGGGTTAACCATTCAAAACGGTGAAGCTGTATTCCTTAATGTTTTGTGAATAATACTTTTCTGTAATTTATTCAATTAAAAAAGGCACTCTTCAGGATCATAATTACCGTTCTTCTATAATTACAAGGTGCCGAATCAACACATATATTATGATGTGTACTGGCCCTTTGTTCCTTTTCCAATAATACAGAACATATTTATCATGTTTTCAGCTACATACACAGTTGCAACTGCAGGGGATTCAACTTATTACTGCAAATCTCTGCTCTTCATTGAAAAATAAGAAGGATTGATCCAATGACTTTATATACTGCAAGATATATCAACACATTCATTAGTTTGTTCATTCAACCGGATTAACGGACATGCTATTTACAcaacacaaacaaaaaaacacaattcatCAAACATCAACAGTGGCACTTTATCGATAGGGCTTATGTGCATCCATTTATTAACAATCCTTAAACATTCTGAGGAATCTGAGATAAATGAAATAAACTATTCTCCACAGCAATACATATCACAGCCATGAATAACCCCTTATGATGACCCTAGGGGATTATATGTCATATATTCCTATGGGTTTATATGACACTGTCCATGAACATGGGAAGATAACGTTACATATGTCCAGACTTGTTAAGTGCATAGTGCTGGATATACAGAAAACATGGAAGCAGGGGAAATCAATACAGATATGTTCATGTTGCTGCGAGTGACCCATGTACAGGTATATAGGGTGACAGGTGACGTGTCTATGTGGAGTCTCTTACTTACTTACTTTTACTTAAGCTATATCATCTTTGTACAGTTACAGGAAACCATCCCTCTTGCATCAGCAGCAGACTTTCATCCACTCTCATTGGTTTGGCGATCGATTGgtgcttccctccctcctctgagcCAATCACCATGCCTGCTGGCCTTGGTGGGAATCCAGGGATGCATGGAGGTGTGGATTGCCACCAAAGCAGCCTCAGAGATGTTGATGGCTCGGTGTGGCTCGGTCTGAGAGTTTGGCAGGGGTGGTGCCTAGGCAAGCCCGGGAAAACAGGTGTTTGGAGAGCTGTTTACTTTCCttgtctgttttttattttttattttgtctcGTTTGATCTGGTCGGAAGCAGGTGGCGTGAGACACCCAGACACCCTGGCCTGTTCTCTGGGGAGCTATGCAGCCTGTGTTTCTCCTTTGTTTGTTCTTTTCTAGTCCTCTGTTTGCTCTAATGCCCTCCCTCCGTCCATAACCCTCCCACTTTCCCGACTCTGTCAATTcggtttaaaaatacctaaaatcTACTTAGGGTCCTCCCCCTGTTCCTGCCACCTCAGAGTATGATACACATCACTGCCCGCGTTAGCAAAATCAGACAAAAATACAACAAAAGTTCTGTCGTCACGGGAAGGGAATATGAACGTGAGATGTGGCTCTGTATTGCTTGTACAGGAGGAGAGCAAAAGCAAAAGAGCAAAAGCTCTTCTTAAGAAAATATTCCCTTCATAAGAATGCTCTCAATTATACTTTTAGATGGCGACTATGAGTAACGGGGAGTTTTACTTTATGGTATAGCTGATTTTCACAGGGTCTCTGGGGGCAGGCTGGGGGTTGCTGTCAGCTGTGTACGGGTGCTTCTTGTTTCTGTCTGTCTAAGTCCACTCCTttgtccctcccttccctctacaCAGTCTGGAAGGCCTTGGTCTGGGCAGGGATCATGACCGGCGTGGCCCCCATGCGGGCCAGGTTCCTGGGGCCCAGTTTGGGGGGAGGGCTGGGCTTGGCCGGGATTGAGTGGAGGAAGTGCCTGAGCGGGAGCTGCCAGagtgggatgaggagagagagttgggcTTTACCAGTTTGGCCTTGGGAGCCTCAGCATCCT

Function

NR:

description
PREDICTED: CXADR-like membrane protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1230892 True 3719 TUCP 0.43 2 48901408 48905274

Neighbor

gene id symbol gene type direction distance location
LOC110537706 LOC106567549 coding downstream 959369 47911648 ~ 47942039 (-)
LOC110537702 LOC106567552 coding downstream 1110378 47712366 ~ 47791030 (-)
LOC110537701 LOC106567554 coding downstream 1190032 47663044 ~ 47711376 (-)
LOC110537700 LOC106567555 coding downstream 1243043 47626656 ~ 47658365 (-)
LOC110537699 LOC106567556 coding downstream 1604373 46911457 ~ 47297035 (-)
LOC110538906 ovol2 coding upstream 316627 49221901 ~ 49228404 (-)
LOC110537714 dlg2 coding upstream 404947 49310221 ~ 49598356 (-)
LOC110537716 NA coding upstream 713294 49618568 ~ 49673217 (-)
crebzf crebzf coding upstream 775687 49680961 ~ 49688023 (-)
picalma LOC106567535 coding upstream 794962 49699388 ~ 49757964 (-)
G1081570 NA non-coding downstream 1095 48899019 ~ 48900313 (-)
G1081566 NA non-coding downstream 7904 48893257 ~ 48893504 (-)
G1081312 NA non-coding downstream 183262 48717898 ~ 48718146 (-)
G1081258 NA non-coding downstream 221280 48679890 ~ 48680128 (-)
G1081235 NA non-coding downstream 241528 48659681 ~ 48659880 (-)
G1081577 NA non-coding upstream 2350 48907624 ~ 48907823 (-)
G1081585 NA non-coding upstream 11291 48916565 ~ 48916850 (-)
G1081588 NA non-coding upstream 12013 48917287 ~ 48917501 (-)
G1081622 NA non-coding upstream 33169 48938443 ~ 48938736 (-)
G1081641 NA non-coding upstream 44855 48950129 ~ 48950576 (-)
G1081055 NA other downstream 482524 48418421 ~ 48418884 (-)
G1078783 NA other downstream 2084343 46816443 ~ 46817065 (-)
G1078323 LOC106567565 other downstream 2695320 46202604 ~ 46206088 (-)
gria4b LOC106567580 other downstream 3748071 45133844 ~ 45296904 (-)
G1081813 NA other upstream 82738 48988012 ~ 48988353 (-)
G1081829 NA other upstream 104075 49009349 ~ 49010152 (-)
G1082693 NA other upstream 772158 49677432 ~ 49680803 (-)
G1083278 NA other upstream 1379225 50284499 ~ 50285313 (-)
G1084224 NA other upstream 1923130 50828404 ~ 50829115 (-)

Expression


Co-expression Network