G1081829



Basic Information


Item Value
gene id G1081829
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 49009349 ~ 49010152 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1231174
aaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagataatgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctctaaactttcagctcatacaaggagaagactgatcagagatgcagtcaagaggcccatgaccactctggatgaactgcagagatttacagctgaggtgggagactctgtccataggacaacaatcattcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcagaatgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatgatttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatggg

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1231174 True 804 TUCP 0.43 1 49009349 49010152

Neighbor


gene id symbol gene type direction distance location
LOC110537706 LOC106567549 coding downstream 1067310 47911648 ~ 47942039 (-)
LOC110537702 LOC106567552 coding downstream 1218319 47712366 ~ 47791030 (-)
LOC110537701 LOC106567554 coding downstream 1297973 47663044 ~ 47711376 (-)
LOC110537700 LOC106567555 coding downstream 1350984 47626656 ~ 47658365 (-)
LOC110537699 LOC106567556 coding downstream 1712314 46911457 ~ 47297035 (-)
LOC110538906 ovol2 coding upstream 211749 49221901 ~ 49228404 (-)
LOC110537714 dlg2 coding upstream 300069 49310221 ~ 49598356 (-)
LOC110537716 NA coding upstream 608416 49618568 ~ 49673217 (-)
crebzf crebzf coding upstream 670809 49680961 ~ 49688023 (-)
picalma LOC106567535 coding upstream 690084 49699388 ~ 49757964 (-)
G1081812 NA non-coding downstream 21409 48987723 ~ 48987940 (-)
G1081810 NA non-coding downstream 22517 48986603 ~ 48986832 (-)
G1081809 NA non-coding downstream 24009 48984948 ~ 48985340 (-)
G1081799 NA non-coding downstream 40339 48968806 ~ 48969010 (-)
G1081641 NA non-coding downstream 58773 48950129 ~ 48950576 (-)
G1081830 NA non-coding upstream 46 49010198 ~ 49010553 (-)
G1081922 NA non-coding upstream 124201 49134353 ~ 49134625 (-)
G1082660 NA non-coding upstream 194771 49204923 ~ 49209752 (-)
G1082779 NA non-coding upstream 352217 49362369 ~ 49362858 (-)
G1082969 NA non-coding upstream 602995 49613147 ~ 49613816 (-)
G1081813 NA other downstream 20996 48988012 ~ 48988353 (-)
G1081571 NA other downstream 104075 48901408 ~ 48905274 (-)
G1081055 NA other downstream 590465 48418421 ~ 48418884 (-)
G1078783 NA other downstream 2192284 46816443 ~ 46817065 (-)
G1082693 NA other upstream 667280 49677432 ~ 49680803 (-)
G1083278 NA other upstream 1274347 50284499 ~ 50285313 (-)
G1084224 NA other upstream 1818252 50828404 ~ 50829115 (-)
G1084908 NA other upstream 2466265 51476417 ~ 51476771 (-)
LOC110537745 LOC106567512 other upstream 2501988 51453362 ~ 51520396 (-)

Expression



Co-expression Network