G1082266


Basic Information

Item Value
gene id G1082266
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 49679023 ~ 49680804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1231639
AATCCAGTCAAAATAGTGTAACATTTAGTTATCAATGTCAAgcaacatacactgctcaaaaaaataaagggaacacttaaacaatgtaacgccaagtcaatcacacttctgtgaaatcaaactgtccacttaggaagcaacactgattgacaataaatttcacatgctgttgtgcaaatggaatagacaacaggtggacatTATAGGCagttagcaagacacccccaataaaggagtggttctgcaggtggggaccacagaccgaccacttctcagttcctatgcttcctggctgatgttttggtcacttttgaatgctggcgatgctttcactctagtggtagcatgagacggagtctacaacccacacaagtggctcaggtagtgcagctcatccaggatggcacatcaatgcgagctgtggcaaaaaggtttgctgtgtctgtcagcgtagtgtccagagcatggaggcgctaccaggagacaggccagtacatcaggagatgtggaggaggccgtaggagggcaacaaccctcctacgctacctccgcctttgtgcaaggaggaacaggaggagcactgccagagccctgcaaaatgacctccagcaagccacaaatgtgcatgtgtctgctcaaactgttagaaacagactccatgagggtggtatgagggcccgacgtccacaggtgggggttgtgcttacagcccaacaccatgcaggacgtttggcatttgccagagaacaccaagattggcaaattcgccactggcgccccgtgctcttcacagatgaaagcaggttcacactgagcacgtgatagacgtgacagagtctggagacgccgtggagaatattctgctgcctgcaacatcctccagcatgaccggtttggcggtgggtcagtcatggtgtggggtagcatttctttggggggccgcacagccctccatgtgctcgccagaggtagcctgactgccattaggtaccgagatgagatcctcagaccccttgtgagaccatatgctggtgcggttggccctgggttcctcctaatgcaagacaatgctagacctcatgtggctggagtgtgtcagcagttcctgcaagaggaaggcattgatgctatggactggcccgcccgttccccagacctgaatccaattgagcacatctgggatatAATGTCTCGCTCCagccaccaacgccacgttgcaccacagactgtacaggagttggcggatgctttagtccaggtctgggaggagatccctcaggagaccatccgccacctcatcaggagcatgcccaggcgttgtagggaggtcatacaggcacgtggaggccacacacactactgagcctcattttgacttgttttaaggacatgccATGCCATCCAGCTCAGCAGTTCCTTACATTATTTGTTGAACATTCAGACCTTGTGGTCTGTCAAAAAGAGTCAATGGCCTACACTACTAGGTGTGTAAATCCTACTATATGCCACAACTCCAAATAAAAAATGGGAAAGATATCCAAAATGACTTGATTTTATAATTTTGAACAGCACATGTATCTATCTAGATTTGTGCTTCAGGCATATAGCTAGACATTAACTTAGTAAGACTAATTTTGAGATCCGAGAACACCCGAAGCCAATTTAAGAGAGTGAACTACTACATTATACCTAAATGCAGCAGCATTATGTCAAAAACAAGTACACCAGACGAATAAGTGTATGCATATACAATATGAGCTCTCCGCTCAAATGAAGCCCCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1231639 True 1782 TUCP 0.49 1 49679023 49680804

Neighbor

gene id symbol gene type direction distance location
tmem126a tmem126a coding upstream 4046 49673087 ~ 49674977 (+)
LOC110537713 LOC106567542 coding upstream 380714 49262142 ~ 49300347 (+)
LOC110537712 LOC106567543 coding upstream 473475 49167549 ~ 49209751 (+)
LOC110537711 LOC106567544 coding upstream 537937 49112328 ~ 49141086 (+)
LOC110537710 LOC106567545 coding upstream 581440 48922904 ~ 49098526 (+)
ccdc83 ccdc83 coding downstream 9819 49690623 ~ 49700822 (+)
LOC110537724 LOC106567531 coding downstream 138878 49819682 ~ 49833619 (+)
LOC118937679 NA coding downstream 168701 49849505 ~ 49852210 (+)
LOC110537726 c2ail coding downstream 319873 50000677 ~ 50001670 (+)
LOC110537728 LOC106567527 coding downstream 342047 50022851 ~ 50043177 (+)
G1082254 NA non-coding upstream 51062 49620932 ~ 49627961 (+)
G1082251 NA non-coding upstream 60497 49618081 ~ 49618526 (+)
G1082250 NA non-coding upstream 60988 49617826 ~ 49618035 (+)
G1082249 NA non-coding upstream 61967 49616551 ~ 49617056 (+)
G1082248 NA non-coding upstream 63375 49615367 ~ 49615648 (+)
G1082293 NA non-coding downstream 24450 49705254 ~ 49708379 (+)
G1082291 LOC106567535 non-coding downstream 29258 49710062 ~ 49713831 (+)
G1082323 NA non-coding downstream 76629 49757433 ~ 49758346 (+)
G1082328 NA non-coding downstream 90565 49771369 ~ 49772170 (+)
G1081353 NA other upstream 931524 48746955 ~ 48747499 (+)
G1077322 NA other upstream 3670414 46004151 ~ 46008609 (+)
nrgna NA other upstream 3758762 45900621 ~ 45920265 (+)
G1077158 NA other upstream 4065258 45611545 ~ 45613765 (+)
G1086237 LOC106567502 other downstream 2968800 52649604 ~ 52657495 (+)
G1087914 NA other downstream 4428886 54109690 ~ 54148962 (+)
LOC110538908 LOC106603872 other downstream 4593502 54253719 ~ 54283905 (+)
G1091217 NA other downstream 7044803 56725607 ~ 56726003 (+)
G1091235 NA other downstream 7071614 56752418 ~ 56752947 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G296203 NA unknown NW_019172826.1 APWO02000044.1 2728308 ~ 2729150 (-)