G1087297


Basic Information

Item Value
gene id G1087297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 53481541 ~ 53482014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1236950
ccagacttacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaactgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1236950 True 474 lncRNA 0.40 1 53481541 53482014

Neighbor

gene id symbol gene type direction distance location
LOC110537771 LOC106567489 coding upstream 61696 53330181 ~ 53419845 (+)
LOC110537768 LOC106567493 coding upstream 348616 53004829 ~ 53132925 (+)
LOC110537765 LOC106567495 coding upstream 620269 52851651 ~ 52861272 (+)
endou2 LOC106567496 coding upstream 630216 52843119 ~ 52851325 (+)
LOC110537763 rnf14 coding upstream 638816 52836678 ~ 52842725 (+)
LOC110537774 NA coding downstream 180511 53662525 ~ 53681131 (+)
LOC110537776 LOC106567605 coding downstream 208290 53690304 ~ 53692630 (+)
LOC100301661 LOC106567454 coding downstream 319648 53801662 ~ 53804908 (+)
LOC110538908 LOC106603872 coding downstream 771705 54253719 ~ 54283905 (+)
ppp2r2bb LOC106567445 coding downstream 877259 54359273 ~ 54460602 (+)
G1087286 NA non-coding upstream 6606 53474717 ~ 53474935 (+)
G1087269 NA non-coding upstream 16011 53465331 ~ 53465530 (+)
G1087248 NA non-coding upstream 30604 53450671 ~ 53450937 (+)
G1087247 NA non-coding upstream 32379 53448934 ~ 53449162 (+)
G1086963 NA non-coding upstream 44699 53388857 ~ 53436842 (+)
G1087312 NA non-coding downstream 11664 53493678 ~ 53493891 (+)
G1087361 NA non-coding downstream 61173 53543187 ~ 53607848 (+)
G1087449 NA non-coding downstream 129050 53611064 ~ 53611269 (+)
G1087458 NA non-coding downstream 139820 53621834 ~ 53622123 (+)
G1087459 NA non-coding downstream 140375 53622389 ~ 53623120 (+)
G1086237 LOC106567502 other upstream 824046 52649604 ~ 52657495 (+)
G1082266 NA other upstream 3800737 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 4181194 49262142 ~ 49300347 (+)
G1081353 NA other upstream 4734042 48746955 ~ 48747499 (+)
G1077322 NA other upstream 7472932 46004151 ~ 46008609 (+)
G1087914 NA other downstream 627676 54109690 ~ 54148962 (+)
G1091217 NA other downstream 3243593 56725607 ~ 56726003 (+)
G1091235 NA other downstream 3270404 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 3633811 57112902 ~ 57118165 (+)

Expression


Co-expression Network