G1087312


Basic Information

Item Value
gene id G1087312
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 53493678 ~ 53493891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1236965
ttttacgtgttatttcttacattagtaccccaggtcatcttaggtttcattacatacagtcgagaagaactactgaatataagatcagcgtcaactcaccatcagtacgaccaagaatatgtttttcgcgatgcggatcctgtgttctgcctttcacccaggacaacggaatggatcccatgcagcgacccaaaaaaacgactccgaaaaagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1236965 True 214 lncRNA 0.43 1 53493678 53493891

Neighbor

gene id symbol gene type direction distance location
LOC110537771 LOC106567489 coding upstream 73833 53330181 ~ 53419845 (+)
LOC110537768 LOC106567493 coding upstream 360753 53004829 ~ 53132925 (+)
LOC110537765 LOC106567495 coding upstream 632406 52851651 ~ 52861272 (+)
endou2 LOC106567496 coding upstream 642353 52843119 ~ 52851325 (+)
LOC110537763 rnf14 coding upstream 650953 52836678 ~ 52842725 (+)
LOC110537774 NA coding downstream 168634 53662525 ~ 53681131 (+)
LOC110537776 LOC106567605 coding downstream 196413 53690304 ~ 53692630 (+)
LOC100301661 LOC106567454 coding downstream 307771 53801662 ~ 53804908 (+)
LOC110538908 LOC106603872 coding downstream 759828 54253719 ~ 54283905 (+)
ppp2r2bb LOC106567445 coding downstream 865382 54359273 ~ 54460602 (+)
G1087297 NA non-coding upstream 11664 53481541 ~ 53482014 (+)
G1087286 NA non-coding upstream 18743 53474717 ~ 53474935 (+)
G1087269 NA non-coding upstream 28148 53465331 ~ 53465530 (+)
G1087248 NA non-coding upstream 42741 53450671 ~ 53450937 (+)
G1087247 NA non-coding upstream 44516 53448934 ~ 53449162 (+)
G1087361 NA non-coding downstream 49296 53543187 ~ 53607848 (+)
G1087449 NA non-coding downstream 117173 53611064 ~ 53611269 (+)
G1087458 NA non-coding downstream 127943 53621834 ~ 53622123 (+)
G1087459 NA non-coding downstream 128498 53622389 ~ 53623120 (+)
G1087512 NA non-coding downstream 235683 53729574 ~ 53730386 (+)
G1086237 LOC106567502 other upstream 836183 52649604 ~ 52657495 (+)
G1082266 NA other upstream 3812874 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 4193331 49262142 ~ 49300347 (+)
G1081353 NA other upstream 4746179 48746955 ~ 48747499 (+)
G1077322 NA other upstream 7485069 46004151 ~ 46008609 (+)
G1087914 NA other downstream 615799 54109690 ~ 54148962 (+)
G1091217 NA other downstream 3231716 56725607 ~ 56726003 (+)
G1091235 NA other downstream 3258527 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 3621934 57112902 ~ 57118165 (+)

Expression


Co-expression Network