G1087399


Basic Information

Item Value
gene id G1087399
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 53535500 ~ 53536147 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1237052
aatagatatttgaaaaataccttgaggattgattataaaaaacgtttgccatgtttctgtcgatattatggatctaatttggaatatttttcggcgttgtcgtgaccgcagtttccggtggatttctcaaccaaacgtgaagtacaaacggaggtatttcggctataaaaattatctttatgggacaaaatgaacatttgctgtctaactgggagtcttgtgagtgaaaacatccgaagctcatcaaaggtaaacgatttaatttgattgcttttctgattttcgtgaccaagttgcctactgctagctggacataatgctatgctaggctatcgataaacttacacaaatgcttgtcttgctttggctgtaaagcataatttcaaaatctgagatgacagggtgattaacaaaaggctaagctgtgtttcactatatttcacttgtgatttcatgaatatgaatattttctagtaatatattttgtccgttgcgttatgctaattggtgtcagttgatgacaattctacCGGATCCGGGAGGGGTAGTTCTAAGAGGTTATGGCCGGTTTCCAACTCACCTCCcgatgtcctcagacatggatggacgtcgaatactgacttgtatcatgggtgacctggctACACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1237052 True 648 lncRNA 0.39 1 53535500 53536147

Neighbor

gene id symbol gene type direction distance location
LOC110537770 LOC106567491 coding downstream 238193 53287252 ~ 53297307 (-)
LOC110537769 LOC106567492 coding downstream 304116 53138615 ~ 53231384 (-)
LOC110537767 LOC106567494 coding downstream 619240 52910240 ~ 52916260 (-)
LOC110537761 LOC106567499 coding downstream 746349 52785753 ~ 52789151 (-)
LOC110537760 LOC106567497 coding downstream 752119 52747273 ~ 52821802 (-)
LOC110537772 LOC106567488 coding upstream 94999 53631146 ~ 53639669 (-)
LOC110537773 lars coding upstream 104076 53640223 ~ 53661031 (-)
il4/13a il4/13a coding upstream 163473 53699620 ~ 53700772 (-)
rad50 rad50 coding upstream 164754 53700901 ~ 53751592 (-)
LOC110537778 LOC106567452 coding upstream 434585 53970732 ~ 53975019 (-)
G1087356 NA non-coding downstream 2599 53532275 ~ 53532901 (-)
G1087337 NA non-coding downstream 21660 53513086 ~ 53513840 (-)
G1087319 NA non-coding downstream 36893 53498330 ~ 53498607 (-)
G1087313 NA non-coding downstream 41720 53493485 ~ 53493780 (-)
G1087282 NA non-coding downstream 61767 53473517 ~ 53473733 (-)
G1087404 NA non-coding upstream 6665 53542812 ~ 53608523 (-)
G1087445 NA non-coding upstream 72985 53609132 ~ 53609352 (-)
G1087544 NA non-coding upstream 82260 53618407 ~ 53618768 (-)
G1087613 NA non-coding upstream 236900 53773047 ~ 53773375 (-)
G1087614 NA non-coding upstream 237521 53773668 ~ 53773901 (-)
G1087093 NA other downstream 402625 53131805 ~ 53132875 (-)
LOC110537745 LOC106567512 other downstream 2018421 51453362 ~ 51520396 (-)
G1084908 NA other downstream 2058729 51476417 ~ 51476771 (-)
G1084224 NA other downstream 2706385 50828404 ~ 50829115 (-)
G1083278 NA other downstream 3250187 50284499 ~ 50285313 (-)
G1090502 NA other upstream 2526283 56062430 ~ 56062707 (-)
LOC110537819 LOC106567417 other upstream 2747607 56283753 ~ 56378107 (-)
G1092205 LOC106567410 other upstream 3321191 56857338 ~ 56859147 (-)
G1092523 NA other upstream 3820017 57291444 ~ 57357274 (-)
pitpnbl LOC107739385 other upstream 5642339 59144152 ~ 59187749 (-)

Expression


Co-expression Network