G1087459


Basic Information

Item Value
gene id G1087459
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 53622389 ~ 53623120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1237112
gttaacatgcatgaaaccaaggctattacggttacagaagtcgtcaaaagagagcgcctggggaataggagtggagctaggcactgcagggcctggattcacctctacatcaccagaggaacataggaggagtagaataaggatgcggctaaaagcaataagaattggtcgtctagaacgtctggaacagagagtaaaaggaggtttctgggggcgataaaatagcatcaaggtataatgtacagacaaaggtaaggtaggatgtgaatacagtggaggtaaacctaggtattgagtgatgaagagagagatattgtctctagaaacatcattgaaaccaggagatgtcattgcatgtgtgggtggtggaactaataggttggataaggtatagtgagcaggactagaggctctacagtgaaataagccaataaacactaaccagaacagcaatggacaagacatattgacattaaggagaggcatgcttagtcgagtgatcaaaagggtccagtgagtggagaggttggttgagggtcacggcgatttagacagctagccaggccatcggtagcaagctagcataggatggaggtctgttgttagccacctcttgcgttcggtcagtagattagtggggttccgtgtggtagaggggattaatccaaatcacacaaaaaaatgtaaaaaataaaaataaaaataagaacaatagatatagttatagaggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1237112 True 732 lncRNA 0.44 1 53622389 53623120

Neighbor

gene id symbol gene type direction distance location
LOC110537771 LOC106567489 coding upstream 202544 53330181 ~ 53419845 (+)
LOC110537768 LOC106567493 coding upstream 489464 53004829 ~ 53132925 (+)
LOC110537765 LOC106567495 coding upstream 761117 52851651 ~ 52861272 (+)
endou2 LOC106567496 coding upstream 771064 52843119 ~ 52851325 (+)
LOC110537763 rnf14 coding upstream 779664 52836678 ~ 52842725 (+)
LOC110537774 NA coding downstream 39405 53662525 ~ 53681131 (+)
LOC110537776 LOC106567605 coding downstream 67184 53690304 ~ 53692630 (+)
LOC100301661 LOC106567454 coding downstream 178542 53801662 ~ 53804908 (+)
LOC110538908 LOC106603872 coding downstream 630599 54253719 ~ 54283905 (+)
ppp2r2bb LOC106567445 coding downstream 736153 54359273 ~ 54460602 (+)
G1087458 NA non-coding upstream 266 53621834 ~ 53622123 (+)
G1087449 NA non-coding upstream 11120 53611064 ~ 53611269 (+)
G1087361 NA non-coding upstream 14541 53543187 ~ 53607848 (+)
G1087312 NA non-coding upstream 128498 53493678 ~ 53493891 (+)
G1087297 NA non-coding upstream 140375 53481541 ~ 53482014 (+)
G1087512 NA non-coding downstream 106454 53729574 ~ 53730386 (+)
G1087514 rad50 non-coding downstream 117384 53740504 ~ 53751607 (+)
G1087637 NA non-coding downstream 170144 53793264 ~ 53793527 (+)
G1087649 NA non-coding downstream 184279 53807399 ~ 53809011 (+)
G1087652 NA non-coding downstream 187079 53810199 ~ 53810423 (+)
G1086237 LOC106567502 other upstream 964894 52649604 ~ 52657495 (+)
G1082266 NA other upstream 3941585 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 4322042 49262142 ~ 49300347 (+)
G1081353 NA other upstream 4874890 48746955 ~ 48747499 (+)
G1077322 NA other upstream 7613780 46004151 ~ 46008609 (+)
G1087914 NA other downstream 486570 54109690 ~ 54148962 (+)
G1091217 NA other downstream 3102487 56725607 ~ 56726003 (+)
G1091235 NA other downstream 3129298 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 3492705 57112902 ~ 57118165 (+)

Expression


Co-expression Network