G1087637


Basic Information

Item Value
gene id G1087637
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 53793264 ~ 53793527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1237314
cctcaaacatagaagtattttacaccattttaaagataaacttgttgttaatcccaccacagtgtccgatttcaaaaaggctttaggacgaaagcacaccaaacgattatgttaggtctgcacctagtcacagaaaaacacagccatttttccagccaaagagaggagtcacaaaaagcagaaatagagataaaattaatcactaacctttgatgatcttcatcagatgacactcataggacttcatgttacacaatatatgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1237314 True 264 lncRNA 0.36 1 53793264 53793527

Neighbor

gene id symbol gene type direction distance location
LOC110537776 LOC106567605 coding upstream 100634 53690304 ~ 53692630 (+)
LOC110537774 NA coding upstream 112133 53662525 ~ 53681131 (+)
LOC110537771 LOC106567489 coding upstream 373419 53330181 ~ 53419845 (+)
LOC110537768 LOC106567493 coding upstream 660339 53004829 ~ 53132925 (+)
LOC110537765 LOC106567495 coding upstream 931992 52851651 ~ 52861272 (+)
LOC100301661 LOC106567454 coding downstream 8135 53801662 ~ 53804908 (+)
LOC110538908 LOC106603872 coding downstream 460192 54253719 ~ 54283905 (+)
ppp2r2bb LOC106567445 coding downstream 565746 54359273 ~ 54460602 (+)
LOC110537791 LOC106567438 coding downstream 1086146 54879673 ~ 54888634 (+)
LOC100136153 LOC100136153 coding downstream 1253633 55047160 ~ 55052488 (+)
G1087514 rad50 non-coding upstream 41657 53740504 ~ 53751607 (+)
G1087512 NA non-coding upstream 62878 53729574 ~ 53730386 (+)
G1087459 NA non-coding upstream 170144 53622389 ~ 53623120 (+)
G1087458 NA non-coding upstream 171141 53621834 ~ 53622123 (+)
G1087449 NA non-coding upstream 181995 53611064 ~ 53611269 (+)
G1087649 NA non-coding downstream 13872 53807399 ~ 53809011 (+)
G1087652 NA non-coding downstream 16672 53810199 ~ 53810423 (+)
G1087665 NA non-coding downstream 32472 53825999 ~ 53826202 (+)
G1087681 NA non-coding downstream 34886 53828413 ~ 53828613 (+)
G1087721 NA non-coding downstream 66107 53859634 ~ 53859836 (+)
G1086237 LOC106567502 other upstream 1135769 52649604 ~ 52657495 (+)
G1082266 NA other upstream 4112460 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 4492917 49262142 ~ 49300347 (+)
G1081353 NA other upstream 5045765 48746955 ~ 48747499 (+)
G1077322 NA other upstream 7784655 46004151 ~ 46008609 (+)
G1087914 NA other downstream 316163 54109690 ~ 54148962 (+)
G1091217 NA other downstream 2932080 56725607 ~ 56726003 (+)
G1091235 NA other downstream 2958891 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 3322298 57112902 ~ 57118165 (+)

Expression


Co-expression Network