Gene
RNA
| Item | Value |
|---|---|
| gene id | G1087652 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 53810199 ~ 53810423 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1237329 | True | 225 | lncRNA | 0.43 | 1 | 53810199 | 53810423 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100301661 | LOC106567454 | coding | upstream | 5291 | 53801662 ~ 53804908 (+) |
| LOC110537776 | LOC106567605 | coding | upstream | 117569 | 53690304 ~ 53692630 (+) |
| LOC110537774 | NA | coding | upstream | 129068 | 53662525 ~ 53681131 (+) |
| LOC110537771 | LOC106567489 | coding | upstream | 390354 | 53330181 ~ 53419845 (+) |
| LOC110537768 | LOC106567493 | coding | upstream | 677274 | 53004829 ~ 53132925 (+) |
| LOC110538908 | LOC106603872 | coding | downstream | 443296 | 54253719 ~ 54283905 (+) |
| ppp2r2bb | LOC106567445 | coding | downstream | 548850 | 54359273 ~ 54460602 (+) |
| LOC110537791 | LOC106567438 | coding | downstream | 1069250 | 54879673 ~ 54888634 (+) |
| LOC100136153 | LOC100136153 | coding | downstream | 1236737 | 55047160 ~ 55052488 (+) |
| LOC110537795 | ablim3 | coding | downstream | 1254698 | 55065121 ~ 55209632 (+) |
| G1087649 | NA | non-coding | upstream | 1188 | 53807399 ~ 53809011 (+) |
| G1087637 | NA | non-coding | upstream | 16672 | 53793264 ~ 53793527 (+) |
| G1087514 | rad50 | non-coding | upstream | 58592 | 53740504 ~ 53751607 (+) |
| G1087512 | NA | non-coding | upstream | 79813 | 53729574 ~ 53730386 (+) |
| G1087459 | NA | non-coding | upstream | 187079 | 53622389 ~ 53623120 (+) |
| G1087665 | NA | non-coding | downstream | 15576 | 53825999 ~ 53826202 (+) |
| G1087681 | NA | non-coding | downstream | 17990 | 53828413 ~ 53828613 (+) |
| G1087721 | NA | non-coding | downstream | 49211 | 53859634 ~ 53859836 (+) |
| G1087730 | NA | non-coding | downstream | 59343 | 53869766 ~ 53870215 (+) |
| G1087944 | LOC107598339 | non-coding | downstream | 348366 | 54158789 ~ 54164032 (+) |
| G1086237 | LOC106567502 | other | upstream | 1152704 | 52649604 ~ 52657495 (+) |
| G1082266 | NA | other | upstream | 4129395 | 49679023 ~ 49680804 (+) |
| LOC110537713 | LOC106567542 | other | upstream | 4509852 | 49262142 ~ 49300347 (+) |
| G1081353 | NA | other | upstream | 5062700 | 48746955 ~ 48747499 (+) |
| G1077322 | NA | other | upstream | 7801590 | 46004151 ~ 46008609 (+) |
| G1087914 | NA | other | downstream | 299267 | 54109690 ~ 54148962 (+) |
| G1091217 | NA | other | downstream | 2915184 | 56725607 ~ 56726003 (+) |
| G1091235 | NA | other | downstream | 2941995 | 56752418 ~ 56752947 (+) |
| LOC110537831 | dhx33 | other | downstream | 3305402 | 57112902 ~ 57118165 (+) |
