G1089013


Basic Information

Item Value
gene id G1089013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 55027664 ~ 55027888 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1238791
gttctatatttaatgaagaaagaacactgaaacaaacttacaaaacaacaaacgaatgTGACGCTATATAATCTAaatgtgcagacacaggcaaatagacatagataataacccacgaaatacccaaagaagatggctgcctaaatatggttctcaatcagagacaacgataaacagctgcctataattgagaaccaatctaggcaaccatagacatgcataaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1238791 True 225 lncRNA 0.36 1 55027664 55027888

Neighbor

gene id symbol gene type direction distance location
LOC110537791 LOC106567438 coding upstream 139030 54879673 ~ 54888634 (+)
ppp2r2bb LOC106567445 coding upstream 567062 54359273 ~ 54460602 (+)
LOC110538908 LOC106603872 coding upstream 746707 54253719 ~ 54283905 (+)
LOC100301661 LOC106567454 coding upstream 1222756 53801662 ~ 53804908 (+)
LOC110537776 LOC106567605 coding upstream 1335034 53690304 ~ 53692630 (+)
LOC100136153 LOC100136153 coding downstream 19272 55047160 ~ 55052488 (+)
LOC110537795 ablim3 coding downstream 37233 55065121 ~ 55209632 (+)
LOC110537794 afap1l1 coding downstream 181842 55209730 ~ 55247859 (+)
LOC110537796 LOC106567431 coding downstream 229546 55257434 ~ 55270161 (+)
LOC110537797 nola2 coding downstream 253843 55281731 ~ 55285435 (+)
G1089011 NA non-coding upstream 2591 55024808 ~ 55025073 (+)
G1088992 NA non-coding upstream 26233 54992764 ~ 55001431 (+)
G1088883 NA non-coding upstream 108668 54890174 ~ 54918996 (+)
G1088896 NA non-coding upstream 138094 54867931 ~ 54889570 (+)
G1088877 NA non-coding upstream 186026 54838201 ~ 54841638 (+)
G1089056 NA non-coding downstream 86306 55114194 ~ 55114513 (+)
G1088894 NA non-coding downstream 161862 55189750 ~ 55205645 (+)
G1088887 NA non-coding downstream 165647 55193535 ~ 55196940 (+)
G1089159 LOC106567483 non-coding downstream 296721 55324609 ~ 55325524 (+)
LOC110537800 LOC106567427 non-coding downstream 348237 55376021 ~ 55398512 (+)
G1087914 NA other upstream 878702 54109690 ~ 54148962 (+)
G1086237 LOC106567502 other upstream 2370169 52649604 ~ 52657495 (+)
G1082266 NA other upstream 5346860 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 5727317 49262142 ~ 49300347 (+)
G1091217 NA other downstream 1697719 56725607 ~ 56726003 (+)
G1091235 NA other downstream 1724530 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 2087937 57112902 ~ 57118165 (+)
LOC110537841 mtmr4 other downstream 2871583 57893341 ~ 58071571 (+)
LOC118937686 NA other downstream 3188267 58216142 ~ 58222215 (+)

Expression


Co-expression Network