Gene
RNA
| Item | Value |
|---|---|
| gene id | G1089056 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 55114194 ~ 55114513 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1238837 | True | 272 | lncRNA | 0.51 | 2 | 55114194 | 55114513 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136153 | LOC100136153 | coding | upstream | 61706 | 55047160 ~ 55052488 (+) |
| LOC110537791 | LOC106567438 | coding | upstream | 225560 | 54879673 ~ 54888634 (+) |
| ppp2r2bb | LOC106567445 | coding | upstream | 653592 | 54359273 ~ 54460602 (+) |
| LOC110538908 | LOC106603872 | coding | upstream | 833237 | 54253719 ~ 54283905 (+) |
| LOC100301661 | LOC106567454 | coding | upstream | 1309286 | 53801662 ~ 53804908 (+) |
| LOC110537794 | afap1l1 | coding | downstream | 95217 | 55209730 ~ 55247859 (+) |
| LOC110537796 | LOC106567431 | coding | downstream | 142921 | 55257434 ~ 55270161 (+) |
| LOC110537797 | nola2 | coding | downstream | 167218 | 55281731 ~ 55285435 (+) |
| LOC110537800 | LOC106567427 | coding | downstream | 261508 | 55376021 ~ 55398512 (+) |
| LOC110537801 | LOC106603903 | coding | downstream | 284462 | 55398975 ~ 55413298 (+) |
| G1089013 | NA | non-coding | upstream | 86306 | 55027664 ~ 55027888 (+) |
| G1089011 | NA | non-coding | upstream | 89121 | 55024808 ~ 55025073 (+) |
| G1088992 | NA | non-coding | upstream | 112763 | 54992764 ~ 55001431 (+) |
| G1088883 | NA | non-coding | upstream | 195198 | 54890174 ~ 54918996 (+) |
| G1088896 | NA | non-coding | upstream | 224624 | 54867931 ~ 54889570 (+) |
| G1088894 | NA | non-coding | downstream | 75237 | 55189750 ~ 55205645 (+) |
| G1088887 | NA | non-coding | downstream | 79022 | 55193535 ~ 55196940 (+) |
| G1089159 | LOC106567483 | non-coding | downstream | 210096 | 55324609 ~ 55325524 (+) |
| G1089196 | NA | non-coding | downstream | 271645 | 55386158 ~ 55387520 (+) |
| G1087914 | NA | other | upstream | 965232 | 54109690 ~ 54148962 (+) |
| G1086237 | LOC106567502 | other | upstream | 2456699 | 52649604 ~ 52657495 (+) |
| G1082266 | NA | other | upstream | 5433390 | 49679023 ~ 49680804 (+) |
| LOC110537713 | LOC106567542 | other | upstream | 5813847 | 49262142 ~ 49300347 (+) |
| G1091217 | NA | other | downstream | 1611094 | 56725607 ~ 56726003 (+) |
| G1091235 | NA | other | downstream | 1637905 | 56752418 ~ 56752947 (+) |
| LOC110537831 | dhx33 | other | downstream | 2001312 | 57112902 ~ 57118165 (+) |
| LOC110537841 | mtmr4 | other | downstream | 2784958 | 57893341 ~ 58071571 (+) |
| LOC118937686 | NA | other | downstream | 3101642 | 58216142 ~ 58222215 (+) |
