Gene
RNA
| Item | Value |
|---|---|
| gene id | G1089206 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 55415326 ~ 55415809 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110538898, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1238994 | True | 484 | lncRNA | 0.43 | 1 | 55415326 | 55415809 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537801 | LOC106603903 | coding | upstream | 2028 | 55398975 ~ 55413298 (+) |
| LOC110537800 | LOC106567427 | coding | upstream | 16814 | 55376021 ~ 55398512 (+) |
| LOC110537797 | nola2 | coding | upstream | 129891 | 55281731 ~ 55285435 (+) |
| LOC110537796 | LOC106567431 | coding | upstream | 145165 | 55257434 ~ 55270161 (+) |
| LOC110537794 | afap1l1 | coding | upstream | 167467 | 55209730 ~ 55247859 (+) |
| LOC110537802 | LOC106603906 | coding | downstream | 35785 | 55451594 ~ 55455336 (+) |
| adra1ba | LOC106567426 | coding | downstream | 184543 | 55600352 ~ 55616323 (+) |
| ttc1 | LOC106567425 | coding | downstream | 209552 | 55625361 ~ 55643340 (+) |
| LOC110537810 | LOC106567475 | coding | downstream | 250864 | 55666673 ~ 55668162 (+) |
| prob1 | LOC106567422 | coding | downstream | 288770 | 55704341 ~ 55714760 (+) |
| G1089196 | NA | non-coding | upstream | 27806 | 55386158 ~ 55387520 (+) |
| G1089159 | LOC106567483 | non-coding | upstream | 89802 | 55324609 ~ 55325524 (+) |
| G1088894 | NA | non-coding | upstream | 209681 | 55189750 ~ 55205645 (+) |
| G1088887 | NA | non-coding | upstream | 218386 | 55193535 ~ 55196940 (+) |
| G1089209 | NA | non-coding | downstream | 5062 | 55420871 ~ 55425203 (+) |
| G1089284 | LOC106567478 | non-coding | downstream | 97821 | 55513630 ~ 55515131 (+) |
| G1089281 | LOC106567478 | non-coding | downstream | 103765 | 55519574 ~ 55521811 (+) |
| G1089812 | NA | non-coding | downstream | 253795 | 55669604 ~ 55670058 (+) |
| G1089813 | NA | non-coding | downstream | 256304 | 55672113 ~ 55672822 (+) |
| LOC110538908 | LOC106603872 | other | upstream | 1134605 | 54253719 ~ 54283905 (+) |
| G1087914 | NA | other | upstream | 1266364 | 54109690 ~ 54148962 (+) |
| G1086237 | LOC106567502 | other | upstream | 2757831 | 52649604 ~ 52657495 (+) |
| G1082266 | NA | other | upstream | 5734522 | 49679023 ~ 49680804 (+) |
| LOC110537713 | LOC106567542 | other | upstream | 6114979 | 49262142 ~ 49300347 (+) |
| G1091217 | NA | other | downstream | 1309798 | 56725607 ~ 56726003 (+) |
| G1091235 | NA | other | downstream | 1336609 | 56752418 ~ 56752947 (+) |
| LOC110537831 | dhx33 | other | downstream | 1700016 | 57112902 ~ 57118165 (+) |
| LOC110537841 | mtmr4 | other | downstream | 2483662 | 57893341 ~ 58071571 (+) |
| LOC118937686 | NA | other | downstream | 2800346 | 58216142 ~ 58222215 (+) |
