Gene
RNA
| Item | Value |
|---|---|
| gene id | G1089284 |
| gene name | LOC106567478 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 55513630 ~ 55515131 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| T-cell immunoglobulin and mucin domain-containing protein 4-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1239080 | True | 584 | lncRNA | 0.44 | 4 | 55513630 | 55515131 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537802 | LOC106603906 | coding | upstream | 58294 | 55451594 ~ 55455336 (+) |
| LOC110537801 | LOC106603903 | coding | upstream | 100332 | 55398975 ~ 55413298 (+) |
| LOC110537800 | LOC106567427 | coding | upstream | 115118 | 55376021 ~ 55398512 (+) |
| LOC110537797 | nola2 | coding | upstream | 228195 | 55281731 ~ 55285435 (+) |
| LOC110537796 | LOC106567431 | coding | upstream | 243469 | 55257434 ~ 55270161 (+) |
| adra1ba | LOC106567426 | coding | downstream | 85221 | 55600352 ~ 55616323 (+) |
| ttc1 | LOC106567425 | coding | downstream | 110230 | 55625361 ~ 55643340 (+) |
| LOC110537810 | LOC106567475 | coding | downstream | 151542 | 55666673 ~ 55668162 (+) |
| prob1 | LOC106567422 | coding | downstream | 189448 | 55704341 ~ 55714760 (+) |
| LOC110537815 | NA | coding | downstream | 276982 | 55792113 ~ 55846902 (+) |
| G1089209 | NA | non-coding | upstream | 88427 | 55420871 ~ 55425203 (+) |
| G1089206 | NA | non-coding | upstream | 97821 | 55415326 ~ 55415809 (+) |
| G1089196 | NA | non-coding | upstream | 126110 | 55386158 ~ 55387520 (+) |
| G1089159 | LOC106567483 | non-coding | upstream | 188106 | 55324609 ~ 55325524 (+) |
| G1089281 | LOC106567478 | non-coding | downstream | 4443 | 55519574 ~ 55521811 (+) |
| G1089812 | NA | non-coding | downstream | 154473 | 55669604 ~ 55670058 (+) |
| G1089813 | NA | non-coding | downstream | 156982 | 55672113 ~ 55672822 (+) |
| G1089814 | LOC106567423 | non-coding | downstream | 158653 | 55673784 ~ 55674562 (+) |
| G1089815 | NA | non-coding | downstream | 160258 | 55675389 ~ 55675627 (+) |
| LOC110538908 | LOC106603872 | other | upstream | 1232909 | 54253719 ~ 54283905 (+) |
| G1087914 | NA | other | upstream | 1364668 | 54109690 ~ 54148962 (+) |
| G1086237 | LOC106567502 | other | upstream | 2856135 | 52649604 ~ 52657495 (+) |
| G1082266 | NA | other | upstream | 5832826 | 49679023 ~ 49680804 (+) |
| LOC110537713 | LOC106567542 | other | upstream | 6213283 | 49262142 ~ 49300347 (+) |
| G1091217 | NA | other | downstream | 1210476 | 56725607 ~ 56726003 (+) |
| G1091235 | NA | other | downstream | 1237287 | 56752418 ~ 56752947 (+) |
| LOC110537831 | dhx33 | other | downstream | 1600694 | 57112902 ~ 57118165 (+) |
| LOC110537841 | mtmr4 | other | downstream | 2384340 | 57893341 ~ 58071571 (+) |
| LOC118937686 | NA | other | downstream | 2701024 | 58216142 ~ 58222215 (+) |
