G1089892


Basic Information

Item Value
gene id G1089892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 55783542 ~ 55783828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1239732
agttaatactttgtagcgccaccttttgctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgataggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1239732 True 287 lncRNA 0.41 1 55783542 55783828

Neighbor

gene id symbol gene type direction distance location
prob1 LOC106567422 coding upstream 71120 55704341 ~ 55714760 (+)
LOC110537810 LOC106567475 coding upstream 115380 55666673 ~ 55668162 (+)
ttc1 LOC106567425 coding upstream 140202 55625361 ~ 55643340 (+)
adra1ba LOC106567426 coding upstream 167219 55600352 ~ 55616323 (+)
LOC110537802 LOC106603906 coding upstream 328206 55451594 ~ 55455336 (+)
LOC110537815 NA coding downstream 8285 55792113 ~ 55846902 (+)
LOC110537817 LOC106567419 coding downstream 97243 55881071 ~ 55889473 (+)
LOC100136702 LOC100136702 coding downstream 470098 56253926 ~ 56255161 (+)
LOC110537822 NA coding downstream 788597 56572425 ~ 56574595 (+)
ube2g1a ube2g1 coding downstream 810482 56594310 ~ 56604376 (+)
G1089890 NA non-coding upstream 1893 55781262 ~ 55781649 (+)
G1089856 pfd1 non-coding upstream 40329 55726068 ~ 55743213 (+)
G1089818 NA non-coding upstream 105771 55677554 ~ 55677771 (+)
G1089817 ccnjl non-coding upstream 106143 55676964 ~ 55677399 (+)
G1089893 NA non-coding downstream 529 55784357 ~ 55784736 (+)
G1089896 NA non-coding downstream 4022 55787850 ~ 55788081 (+)
G1089921 NA non-coding downstream 71921 55855749 ~ 55856047 (+)
G1089919 NA non-coding downstream 75126 55858954 ~ 55859387 (+)
G1089920 NA non-coding downstream 76436 55860264 ~ 55860483 (+)
LOC110538908 LOC106603872 other upstream 1502821 54253719 ~ 54283905 (+)
G1087914 NA other upstream 1634580 54109690 ~ 54148962 (+)
G1086237 LOC106567502 other upstream 3126047 52649604 ~ 52657495 (+)
G1082266 NA other upstream 6102738 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 6483195 49262142 ~ 49300347 (+)
G1091217 NA other downstream 941779 56725607 ~ 56726003 (+)
G1091235 NA other downstream 968590 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 1331997 57112902 ~ 57118165 (+)
LOC110537841 mtmr4 other downstream 2115643 57893341 ~ 58071571 (+)
LOC118937686 NA other downstream 2432327 58216142 ~ 58222215 (+)

Expression


Co-expression Network