G1089893


Basic Information

Item Value
gene id G1089893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 55784357 ~ 55784736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1239733
gtttgtctctctgaatgggagtctgttggatgactggtgtggtgtagttcACTGCaaatatattgtatgttttggatattcaatgaaaaaaatatatatatatactttcaagtacttaagtagttttttggggtatctgtactttactttactatttatatttttgacaacttttacttcactacattcctaaagaaaataatgtacattttactccatacatttttcctaacacccaaaagtacttgtttattttgacaggaaaatggtcaaatttaCGCACTTATCAAGGGAAcatcgctggtcatccctactgcctctgatctggcagactacctaaacacaaatgcttcatttgtaaatgaatGTCTGAGTGGTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1239733 True 380 lncRNA 0.33 1 55784357 55784736

Neighbor

gene id symbol gene type direction distance location
prob1 LOC106567422 coding upstream 71935 55704341 ~ 55714760 (+)
LOC110537810 LOC106567475 coding upstream 116195 55666673 ~ 55668162 (+)
ttc1 LOC106567425 coding upstream 141017 55625361 ~ 55643340 (+)
adra1ba LOC106567426 coding upstream 168034 55600352 ~ 55616323 (+)
LOC110537802 LOC106603906 coding upstream 329021 55451594 ~ 55455336 (+)
LOC110537815 NA coding downstream 7377 55792113 ~ 55846902 (+)
LOC110537817 LOC106567419 coding downstream 96335 55881071 ~ 55889473 (+)
LOC100136702 LOC100136702 coding downstream 469190 56253926 ~ 56255161 (+)
LOC110537822 NA coding downstream 787689 56572425 ~ 56574595 (+)
ube2g1a ube2g1 coding downstream 809574 56594310 ~ 56604376 (+)
G1089892 NA non-coding upstream 529 55783542 ~ 55783828 (+)
G1089890 NA non-coding upstream 2708 55781262 ~ 55781649 (+)
G1089856 pfd1 non-coding upstream 41144 55726068 ~ 55743213 (+)
G1089818 NA non-coding upstream 106586 55677554 ~ 55677771 (+)
G1089896 NA non-coding downstream 3114 55787850 ~ 55788081 (+)
G1089921 NA non-coding downstream 71013 55855749 ~ 55856047 (+)
G1089919 NA non-coding downstream 74218 55858954 ~ 55859387 (+)
G1089920 NA non-coding downstream 75528 55860264 ~ 55860483 (+)
G1089936 NA non-coding downstream 95850 55880586 ~ 55880807 (+)
LOC110538908 LOC106603872 other upstream 1503636 54253719 ~ 54283905 (+)
G1087914 NA other upstream 1635395 54109690 ~ 54148962 (+)
G1086237 LOC106567502 other upstream 3126862 52649604 ~ 52657495 (+)
G1082266 NA other upstream 6103553 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 6484010 49262142 ~ 49300347 (+)
G1091217 NA other downstream 940871 56725607 ~ 56726003 (+)
G1091235 NA other downstream 967682 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 1331089 57112902 ~ 57118165 (+)
LOC110537841 mtmr4 other downstream 2114735 57893341 ~ 58071571 (+)
LOC118937686 NA other downstream 2431419 58216142 ~ 58222215 (+)

Expression


Co-expression Network