G1092074


Basic Information

Item Value
gene id G1092074
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 58208149 ~ 58208834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1242088
cactccactatgtctcactgtcatggcttttgctccatcagtacagataccaacacatcttgaccaccaaagtccatttgatgtcacaaagctgtcctgtactttaaaaatatcctctcgtgttgtcctggtttccagtggtttgcagaagaggatgtcttccttaattgacccccccataaatgtaacggacatataccaggagctgtgccaagcccgccacgtctgttgactcatccagctgtaacgcatataattcactaGCTTGTATgggaagcagtaattgtttcaaaacatctcctgccatatcactgatgcgtcgtgaaccAGTGTTGTTTGATGATGGCATTgttttttttggccttttcccccagcattgtcccagccatatccacggcagcaggaagaattaagtcctccagaatagcatggggcttgcctgtcctagccactcagtagctcacaatataagacgcttctacccccttcttattaatggtatctgttgcttatATTTAcacgtcttactactcgaaagtagtcttaattctcgctcaaaaaactcctgtggcttatttttcaaattggcatgttttgtttctaaatgtctgcgcaagagtgaagttTTCATCAAGTTGTActtataacacactgtggctgaggaaagacactactcccaatataag

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1242088 True 686 lncRNA 0.43 1 58208149 58208834
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110537844 LOC106567395 coding upstream 23700 58159958 ~ 58184449 (+)
ca4a NA coding upstream 106613 58076921 ~ 58101536 (+)
LOC110537841 mtmr4 coding upstream 136578 57893341 ~ 58071571 (+)
LOC110537840 rnf43 coding upstream 371881 57661839 ~ 57836268 (+)
LOC118937890 NA coding upstream 546588 57658505 ~ 57661561 (+)
LOC118937686 NA coding downstream 7308 58216142 ~ 58222215 (+)
LOC110537846 ggnbp2 coding downstream 16953 58225787 ~ 58272786 (+)
LOC110537848 sp30l coding downstream 65184 58274018 ~ 58286628 (+)
LOC110539153 LOC106604490 coding downstream 319456 58528290 ~ 58530219 (+)
LOC110538918 nkx3-2 coding downstream 336312 58545146 ~ 58546597 (+)
G1092072 NA non-coding upstream 2376 58205108 ~ 58205773 (+)
G1092071 NA non-coding upstream 3185 58204710 ~ 58204964 (+)
G1092052 vkorc1l1 non-coding upstream 5457 58161242 ~ 58202692 (+)
G1091964 NA non-coding upstream 144789 57994286 ~ 58063360 (+)
G1091938 NA non-coding upstream 257700 57950185 ~ 57950449 (+)
G1092075 NA non-coding downstream 584 58209418 ~ 58210303 (+)
G1092077 NA non-coding downstream 4464 58213298 ~ 58213583 (+)
G1092080 NA non-coding downstream 15572 58224406 ~ 58224606 (+)
G1092102 NA non-coding downstream 83894 58292728 ~ 58292951 (+)
LOC110537831 dhx33 other upstream 1090222 57112902 ~ 57118165 (+)
G1091235 NA other upstream 1455202 56752418 ~ 56752947 (+)
G1091217 NA other upstream 1482146 56725607 ~ 56726003 (+)
LOC110538908 LOC106603872 other upstream 3927428 54253719 ~ 54283905 (+)
G1093909 NA other downstream 1332724 59541558 ~ 59542603 (+)
G1094218 LOC100380853 other downstream 1822169 60031003 ~ 60034020 (+)
G1095244 LOC108238713 other downstream 2176830 60385664 ~ 60385973 (+)
LOC110539079 LOC106600700 other downstream 2487853 60696612 ~ 60777061 (+)

Expression

G1092074 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
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G1092074 Expression in each Bioproject

Bar chart with 20 bars.
G1092074 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network