G1093248


Basic Information

Item Value
gene id G1093248
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 58415787 ~ 58421231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1243330
gtacttggtaaggatctgtctctgcttcgtatctctgacagagtagagataatcagccaattcatattctctgtttagggtcagatagcaatttagtcggctttgggattttgttttgtttttccagtattgtaaatatgattcctttgattggttcatgattttgcttattggaattctttcttttgaagcagtgctggtgtcagcttggttggtgaggtccaacaccagctgactgagagggctcgtttctgggctcagctcttgggcttgaagtgctttaaattgcagactcgaattt

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1243330 True 301 lncRNA 0.41 2 58415787 58421231

Neighbor

gene id symbol gene type direction distance location
LOC110537848 sp30l coding upstream 129159 58274018 ~ 58286628 (+)
LOC110537846 ggnbp2 coding upstream 143001 58225787 ~ 58272786 (+)
LOC118937686 NA coding upstream 193572 58216142 ~ 58222215 (+)
LOC110537844 LOC106567395 coding upstream 231338 58159958 ~ 58184449 (+)
ca4a NA coding upstream 314251 58076921 ~ 58101536 (+)
LOC110539153 LOC106604490 coding downstream 107059 58528290 ~ 58530219 (+)
LOC110538918 nkx3-2 coding downstream 123915 58545146 ~ 58546597 (+)
rab28 LOC106600633 coding downstream 154370 58575601 ~ 58625910 (+)
LOC110538919 atp8a1 coding downstream 269886 58691117 ~ 58827450 (+)
LOC110538920 NA coding downstream 429505 58850736 ~ 58873451 (+)
G1093243 NA non-coding upstream 603 58402466 ~ 58415184 (+)
G1093244 NA non-coding upstream 4928 58403296 ~ 58410859 (+)
G1093233 NA non-coding upstream 30860 58384723 ~ 58384927 (+)
G1093228 NA non-coding upstream 39012 58376559 ~ 58376775 (+)
G1093215 NA non-coding upstream 53114 58362411 ~ 58362673 (+)
G1093252 NA non-coding downstream 4115 58425346 ~ 58459681 (+)
G1093326 NA non-coding downstream 83565 58504796 ~ 58505068 (+)
G1093397 NA non-coding downstream 185587 58606818 ~ 58607396 (+)
G1093401 NA non-coding downstream 194104 58615335 ~ 58615695 (+)
G1093404 NA non-coding downstream 201431 58622662 ~ 58622907 (+)
LOC110537841 mtmr4 other upstream 500955 57893341 ~ 58071571 (+)
LOC110537831 dhx33 other upstream 1297860 57112902 ~ 57118165 (+)
G1091235 NA other upstream 1662840 56752418 ~ 56752947 (+)
G1091217 NA other upstream 1689784 56725607 ~ 56726003 (+)
G1093909 NA other downstream 1120327 59541558 ~ 59542603 (+)
G1094218 LOC100380853 other downstream 1609772 60031003 ~ 60034020 (+)
G1095244 LOC108238713 other downstream 1964433 60385664 ~ 60385973 (+)
LOC110539079 LOC106600700 other downstream 2275456 60696612 ~ 60777061 (+)
G1095209 NA other downstream 2395260 60816491 ~ 60818897 (+)

Expression


Co-expression Network