Gene
RNA
| Item | Value |
|---|---|
| gene id | G1093252 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 58425346 ~ 58459681 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1243335 | True | 229 | lncRNA | 0.40 | 2 | 58425346 | 58459681 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537848 | sp30l | coding | upstream | 138718 | 58274018 ~ 58286628 (+) |
| LOC110537846 | ggnbp2 | coding | upstream | 152560 | 58225787 ~ 58272786 (+) |
| LOC118937686 | NA | coding | upstream | 203131 | 58216142 ~ 58222215 (+) |
| LOC110537844 | LOC106567395 | coding | upstream | 240897 | 58159958 ~ 58184449 (+) |
| ca4a | NA | coding | upstream | 323810 | 58076921 ~ 58101536 (+) |
| LOC110539153 | LOC106604490 | coding | downstream | 68609 | 58528290 ~ 58530219 (+) |
| LOC110538918 | nkx3-2 | coding | downstream | 85465 | 58545146 ~ 58546597 (+) |
| rab28 | LOC106600633 | coding | downstream | 115920 | 58575601 ~ 58625910 (+) |
| LOC110538919 | atp8a1 | coding | downstream | 231436 | 58691117 ~ 58827450 (+) |
| LOC110538920 | NA | coding | downstream | 391055 | 58850736 ~ 58873451 (+) |
| G1093248 | NA | non-coding | upstream | 4115 | 58415787 ~ 58421231 (+) |
| G1093243 | NA | non-coding | upstream | 10162 | 58402466 ~ 58415184 (+) |
| G1093244 | NA | non-coding | upstream | 14487 | 58403296 ~ 58410859 (+) |
| G1093233 | NA | non-coding | upstream | 40419 | 58384723 ~ 58384927 (+) |
| G1093228 | NA | non-coding | upstream | 48571 | 58376559 ~ 58376775 (+) |
| G1093326 | NA | non-coding | downstream | 45115 | 58504796 ~ 58505068 (+) |
| G1093397 | NA | non-coding | downstream | 147137 | 58606818 ~ 58607396 (+) |
| G1093401 | NA | non-coding | downstream | 155654 | 58615335 ~ 58615695 (+) |
| G1093404 | NA | non-coding | downstream | 162981 | 58622662 ~ 58622907 (+) |
| LOC110537841 | mtmr4 | other | upstream | 510514 | 57893341 ~ 58071571 (+) |
| LOC110537831 | dhx33 | other | upstream | 1307419 | 57112902 ~ 57118165 (+) |
| G1091235 | NA | other | upstream | 1672399 | 56752418 ~ 56752947 (+) |
| G1091217 | NA | other | upstream | 1699343 | 56725607 ~ 56726003 (+) |
| G1093909 | NA | other | downstream | 1081877 | 59541558 ~ 59542603 (+) |
| G1094218 | LOC100380853 | other | downstream | 1571322 | 60031003 ~ 60034020 (+) |
| G1095244 | LOC108238713 | other | downstream | 1925983 | 60385664 ~ 60385973 (+) |
| LOC110539079 | LOC106600700 | other | downstream | 2237006 | 60696612 ~ 60777061 (+) |
| G1095209 | NA | other | downstream | 2356810 | 60816491 ~ 60818897 (+) |
