G1093401


Basic Information

Item Value
gene id G1093401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 58615335 ~ 58615695 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1243508
TTCTACTTAAataactttatatatatatatatatatatatatagtattcatTTGTTTTATATCTGTCCATGAGTTTCTACTAGATAGATCATGATtaaagagaaaatagcctaattaatttGAAAAAGTAcataatcaacaatggcattattttcaatgCTCTGCAACTTTTCCAACTAtttacttttttcacaactgccaccagtttgattTCAAATtattgacaacaaatacatattgacatagtTCTAGTAAATCAATAAAAGTgtgtataaaaaaatatgaagGATATTTAATGATGAaacaatggtattcactaagtttaTGGTTTAATAATGATAATGTTTTCATAATAAAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1243508 True 361 lncRNA 0.23 1 58615335 58615695

Neighbor

gene id symbol gene type direction distance location
LOC110538918 nkx3-2 coding upstream 68738 58545146 ~ 58546597 (+)
LOC110539153 LOC106604490 coding upstream 85116 58528290 ~ 58530219 (+)
LOC110537848 sp30l coding upstream 328707 58274018 ~ 58286628 (+)
LOC110537846 ggnbp2 coding upstream 342549 58225787 ~ 58272786 (+)
LOC118937686 NA coding upstream 393120 58216142 ~ 58222215 (+)
LOC110538919 atp8a1 coding downstream 75422 58691117 ~ 58827450 (+)
LOC110538920 NA coding downstream 235041 58850736 ~ 58873451 (+)
LOC110537867 LOC106600640 coding downstream 259706 58875401 ~ 58917409 (+)
LOC110537868 LOC106600641 coding downstream 319835 58935530 ~ 58959234 (+)
LOC110537870 LOC100380866 coding downstream 346072 58961767 ~ 58975136 (+)
G1093397 NA non-coding upstream 7939 58606818 ~ 58607396 (+)
G1093326 NA non-coding upstream 110267 58504796 ~ 58505068 (+)
G1093252 NA non-coding upstream 155654 58425346 ~ 58459681 (+)
G1093248 NA non-coding upstream 194104 58415787 ~ 58421231 (+)
G1093243 NA non-coding upstream 200151 58402466 ~ 58415184 (+)
G1093404 NA non-coding downstream 6967 58622662 ~ 58622907 (+)
rab28 LOC106600633 non-coding downstream 8134 58575601 ~ 58625910 (+)
G1093349 NA non-coding downstream 11130 58626825 ~ 58627165 (+)
G1093411 NA non-coding downstream 16893 58632588 ~ 58632818 (+)
G1093415 NA non-coding downstream 22126 58637821 ~ 58638142 (+)
LOC110537841 mtmr4 other upstream 700503 57893341 ~ 58071571 (+)
LOC110537831 dhx33 other upstream 1497408 57112902 ~ 57118165 (+)
G1091235 NA other upstream 1862388 56752418 ~ 56752947 (+)
G1091217 NA other upstream 1889332 56725607 ~ 56726003 (+)
G1093909 NA other downstream 925863 59541558 ~ 59542603 (+)
G1094218 LOC100380853 other downstream 1415308 60031003 ~ 60034020 (+)
G1095244 LOC108238713 other downstream 1769969 60385664 ~ 60385973 (+)
LOC110539079 LOC106600700 other downstream 2080992 60696612 ~ 60777061 (+)
G1095209 NA other downstream 2200796 60816491 ~ 60818897 (+)

Expression


Co-expression Network