Gene
RNA
| Item | Value |
|---|---|
| gene id | G1093714 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 58982273 ~ 58982472 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1243888 | True | 200 | lncRNA | 0.35 | 1 | 58982273 | 58982472 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537870 | LOC100380866 | coding | upstream | 7137 | 58961767 ~ 58975136 (+) |
| LOC110537868 | LOC106600641 | coding | upstream | 23039 | 58935530 ~ 58959234 (+) |
| LOC110537867 | LOC106600640 | coding | upstream | 64864 | 58875401 ~ 58917409 (+) |
| LOC110538920 | NA | coding | upstream | 108822 | 58850736 ~ 58873451 (+) |
| LOC110538919 | atp8a1 | coding | upstream | 157702 | 58691117 ~ 58827450 (+) |
| LOC110537871 | LOC106604470 | coding | downstream | 69857 | 59052329 ~ 59106006 (+) |
| sez6l2 | sez6l2 | coding | downstream | 250882 | 59233354 ~ 59343106 (+) |
| kctd13 | LOC106600645 | coding | downstream | 368307 | 59350779 ~ 59389927 (+) |
| hirip3 | hirip3 | coding | downstream | 416263 | 59398735 ~ 59422218 (+) |
| antkmt | fam173a | coding | downstream | 440364 | 59422836 ~ 59436071 (+) |
| G1093713 | NA | non-coding | upstream | 753 | 58981256 ~ 58981520 (+) |
| G1093680 | NA | non-coding | upstream | 89110 | 58892952 ~ 58893163 (+) |
| G1093678 | NA | non-coding | upstream | 91377 | 58890622 ~ 58890896 (+) |
| G1093544 | NA | non-coding | upstream | 307466 | 58674579 ~ 58674807 (+) |
| G1093715 | NA | non-coding | downstream | 163 | 58982635 ~ 58982914 (+) |
| G1093719 | NA | non-coding | downstream | 3975 | 58986447 ~ 58987204 (+) |
| G1093810 | NA | non-coding | downstream | 136250 | 59118722 ~ 59118929 (+) |
| G1093820 | NA | non-coding | downstream | 149714 | 59132186 ~ 59132476 (+) |
| G1093823 | NA | non-coding | downstream | 160806 | 59143278 ~ 59143511 (+) |
| LOC118937686 | NA | other | upstream | 760083 | 58216142 ~ 58222215 (+) |
| LOC110537841 | mtmr4 | other | upstream | 1067441 | 57893341 ~ 58071571 (+) |
| LOC110537831 | dhx33 | other | upstream | 1864346 | 57112902 ~ 57118165 (+) |
| G1091235 | NA | other | upstream | 2229326 | 56752418 ~ 56752947 (+) |
| G1091217 | NA | other | upstream | 2256270 | 56725607 ~ 56726003 (+) |
| G1093909 | NA | other | downstream | 559086 | 59541558 ~ 59542603 (+) |
| G1094218 | LOC100380853 | other | downstream | 1048531 | 60031003 ~ 60034020 (+) |
| G1095244 | LOC108238713 | other | downstream | 1403192 | 60385664 ~ 60385973 (+) |
| LOC110539079 | LOC106600700 | other | downstream | 1714215 | 60696612 ~ 60777061 (+) |
| G1095209 | NA | other | downstream | 1834019 | 60816491 ~ 60818897 (+) |
